LINC00316 Gene

Name long intergenic non-protein coding RNA 316
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n In the study by Paschou et al. (1) investigating the genetic overlap between Gilles de la Tourette Syndrome and Attention Deficit/Hyperactivity Disorder, the reported findings focused on several protein‐coding genes (e.g., TBC1D7, GUCY1A3, RAP1GDS1, CHST11) implicated in pathways such as mTOR signaling. Notably, LINC00316 is not mentioned or functionally characterized within this abstract. Thus, based on the reported data in this study, no role or functional contribution of LINC00316 to the neurodevelopmental phenotypes has been described. Any inference regarding LINC00316’s involvement in these disorders would require additional data or studies explicitly addressing this long noncoding RNA."}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Fotis Tsetsos, Shanmukha S Padmanabhuni, John Alexander, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Meta-Analysis of Tourette Syndrome and Attention Deficit Hyperactivity Disorder Provides Support for a Shared Genetic Basis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Neurosci (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3389/fnins.2016.00340"}], "href": "https://doi.org/10.3389/fnins.2016.00340"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27499730"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27499730"}]}]}]}
Synonyms PRED59, C21ORF111, NCRNA00316
NCBI Gene ID 388830
API
Download Associations
Predicted Functions View LINC00316's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC00316's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC00316's ARCHS4 Predicted Functions.

Functional Associations

LINC00316 has 130 functional associations with biological entities spanning 4 categories (molecular profile, disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA) extracted from 6 datasets.

Click the + buttons to view associations for LINC00316 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
ChEA Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of LINC00316 gene from the CHEA Transcription Factor Binding Site Profiles dataset.
ChEA Transcription Factor Targets transcription factors binding the promoter of LINC00316 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of LINC00316 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GWASdb SNP-Disease Associations diseases associated with LINC00316 gene in GWAS and other genetic association datasets from the GWASdb SNP-Disease Associations dataset.
GWASdb SNP-Phenotype Associations phenotypes associated with LINC00316 gene in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00316 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.