LINC00317 Gene

Name long intergenic non-protein coding RNA 317
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n The abstract"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "describes an investigation into the cytokine responses of bronchial epithelial cells from COPD patients following tumor necrosis factor‐α stimulation. In this study, increased production of interleukin‑6 and interleukin‑8 was observed in cells from COPD patients compared with those from smokers with normal lung function, and inhaled steroid treatment appeared to dampen this response. It is important to note that this abstract does not mention LINC00317 or provide any details regarding its function. Therefore, based solely on the provided abstract, no conclusions or summaries can be drawn about the role or function of LINC00317.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "I S Patel, N J Roberts, S J Lloyd-Owen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Airway epithelial inflammatory responses and clinical parameters in COPD."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Eur Respir J (2003)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1183/09031936.03.00093703"}], "href": "https://doi.org/10.1183/09031936.03.00093703"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12882457"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12882457"}]}]}]}
Synonyms NCRNA00317, PRED89, C21ORF117
NCBI Gene ID 378828
API
Download Associations
Predicted Functions View LINC00317's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC00317's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC00317's ARCHS4 Predicted Functions.

Functional Associations

LINC00317 has 235 functional associations with biological entities spanning 6 categories (molecular profile, functional term, phrase or reference, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 12 datasets.

Click the + buttons to view associations for LINC00317 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00317 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
CCLE Cell Line Gene Expression Profiles cell lines with high or low expression of LINC00317 gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00317 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at LINC00317 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of LINC00317 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of LINC00317 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GeneSigDB Published Gene Signatures PubMedIDs of publications reporting gene signatures containing LINC00317 from the GeneSigDB Published Gene Signatures dataset.
GEO Signatures of Differentially Expressed Genes for Diseases disease perturbations changing expression of LINC00317 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of LINC00317 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of LINC00317 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00317 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at LINC00317 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.