LINC00319 Gene

Name long intergenic non-protein coding RNA 319
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC00319 is a long noncoding RNA that is recurrently upregulated across a wide spectrum of human cancers and even in ischemic stroke, acting predominantly as an oncogenic regulator by functioning as a competing endogenous RNA. In ovarian cancer, for instance, LINC00319 promotes cell proliferation, migration, and invasion by sponging miR‐423‑5p to upregulate NACC1 expression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In lung adenocarcinoma and lung cancer, its elevated expression is linked with poor patient prognosis, with studies demonstrating that LINC00319 accelerates tumor growth by modulating the miR‑450b‑5p/EZH2 pathway as well as by directly binding miR‑32, leading to increased expression of oncogenic targets such as AURKA, SOX9, and TWIST1."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " In oral squamous cell carcinoma, LINC00319 enhances malignant behaviors by sequestering miR‑199a‑5p and consequently upregulating FZD4."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": " Similarly, in nasopharyngeal carcinoma, it facilitates tumor progression via the miR‑1207‑5p/KLF12 axis"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": ", while in acute myeloid leukemia it is transcriptionally activated by MYC and further promotes leukemogenesis through an FUS‑dependent regulation of SIRT6."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": " In bladder cancer, LINC00319 acts as a molecular sponge for miR‑4492, leading to the upregulation of ROMO1 and enhanced tumor aggressiveness"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": ", and in cervical cancer, it drives cell migration, invasion, and epithelial–mesenchymal transition by modulating the miR‑3127‑5p/RPP25 axis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": " Moreover, in glioma, LINC00319 directly binds to TAF1 to regulate HMGA2 expression, thereby contributing to tumorigenesis"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": ", and in osteosarcoma, it enhances cell migration by affecting the miR‑455‑3p/NFIB pathway."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "10"}]}, {"type": "t", "text": " Outside the realm of oncology, LINC00319 also aggravates neuronal injury in ischemic stroke by competitively binding to miR‑200a‑3p, which leads to increased apoptosis and reduced neuronal viability."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "11"}]}, {"type": "t", "text": " Collectively, these findings underscore the multifaceted role of LINC00319 as a promoter of malignant progression and cellular injury, highlighting its potential as both a prognostic biomarker and a therapeutic target in diverse pathological contexts.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Wenling Du, Zejiao Feng, Qinqin Sun "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA LINC00319 accelerates ovarian cancer progression through miR-423-5p/NACC1 pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2018.11.006"}], "href": "https://doi.org/10.1016/j.bbrc.2018.11.006"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30442370"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30442370"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Zeng-Wang Zhang, Jia-Jun Chen, Shi-Hui Xia, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long intergenic non-protein coding RNA 319 aggravates lung adenocarcinoma carcinogenesis by modulating miR-450b-5p/EZH2."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Gene (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.gene.2018.01.096"}], "href": "https://doi.org/10.1016/j.gene.2018.01.096"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29408583"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29408583"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Bo Zhou, Wenwen Yuan, Xinping Li "}, {"type": "b", "children": [{"type": "t", "text": "Long Intergenic Noncoding RNA 319 (linc00319) Promotes Cell Proliferation and Invasion in Lung Cancer Cells by Directly Downregulating the Tumor Suppressor MiR-32."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncol Res (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3727/096504017X15016337254650"}], "href": "https://doi.org/10.3727/096504017X15016337254650"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28800794"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28800794"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Xiao Jiang, Jingpeng Liu, Simin Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CCL18-induced LINC00319 promotes proliferation and metastasis in oral squamous cell carcinoma via the miR-199a-5p/FZD4 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Death Dis (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41419-020-02978-w"}], "href": "https://doi.org/10.1038/s41419-020-02978-w"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32948745"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32948745"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Peng Song, Shu-Cheng Yin "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA 319 facilitates nasopharyngeal carcinoma carcinogenesis through regulation of miR-1207-5p/KLF12 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Gene (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.gene.2018.09.032"}], "href": "https://doi.org/10.1016/j.gene.2018.09.032"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30243935"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30243935"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Yanni Zhang, Zongxuan Huang, Fen Sheng, et al. "}, {"type": "b", "children": [{"type": "t", "text": "MYC upregulated LINC00319 promotes human acute myeloid leukemia (AML) cells growth through stabilizing SIRT6."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2018.12.133"}], "href": "https://doi.org/10.1016/j.bbrc.2018.12.133"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30587342"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30587342"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Yu Yang, Fangyi Zhang, Hang Huang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long noncoding RNA LINC00319 regulates ROMO1 expression and promotes bladder cancer progression via miR-4492/ROMO1 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Physiol (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jcp.29271"}], "href": "https://doi.org/10.1002/jcp.29271"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31608995"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31608995"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Jian Yang, Shunyu Hou, Baoquan Liang "}, {"type": "b", "children": [{"type": "t", "text": "LINC00319 promotes migration, invasion and epithelial-mesenchymal transition process in cervical cancer by regulating miR-3127-5p/RPP25 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "In Vitro Cell Dev Biol Anim (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s11626-019-00425-5"}], "href": "https://doi.org/10.1007/s11626-019-00425-5"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31942724"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31942724"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Qiang Li, Qingwu Wu, Zheng Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA LINC00319 is associated with tumorigenesis and poor prognosis in glioma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Eur J Pharmacol (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.ejphar.2019.172556"}], "href": "https://doi.org/10.1016/j.ejphar.2019.172556"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31325436"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31325436"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Farui Sun, Ziliang Yu, Bingbing Wu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00319 promotes osteosarcoma progression by regulating the miR-455-3p/NFIB axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Gene Med (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jgm.3248"}], "href": "https://doi.org/10.1002/jgm.3248"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32621625"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32621625"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Hui Yang, He Wang, Xiaodan Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Upregulated LINC00319 aggravates neuronal injury induced by oxygen-glucose deprivation via modulating miR-200a-3p."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Exp Ther Med (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/etm.2021.10276"}], "href": "https://doi.org/10.3892/etm.2021.10276"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34149890"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34149890"}]}]}]}
Synonyms NCRNA00319, C21ORF125, PRED49
NCBI Gene ID 284836
API
Download Associations
Predicted Functions View LINC00319's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC00319's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC00319's ARCHS4 Predicted Functions.

Functional Associations

LINC00319 has 1,258 functional associations with biological entities spanning 6 categories (molecular profile, organism, functional term, phrase or reference, disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA) extracted from 24 datasets.

Click the + buttons to view associations for LINC00319 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles tissues with high or low expression of LINC00319 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset.
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray tissue samples with high or low expression of LINC00319 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray dataset.
Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles tissues with high or low expression of LINC00319 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00319 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
CCLE Cell Line Gene Expression Profiles cell lines with high or low expression of LINC00319 gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset.
ChEA Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of LINC00319 gene from the CHEA Transcription Factor Binding Site Profiles dataset.
ChEA Transcription Factor Targets transcription factors binding the promoter of LINC00319 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00319 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at LINC00319 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of LINC00319 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of LINC00319 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GeneRIF Biological Term Annotations biological terms co-occuring with LINC00319 gene in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.
GEO Signatures of Differentially Expressed Genes for Diseases disease perturbations changing expression of LINC00319 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of LINC00319 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations transcription factor perturbations changing expression of LINC00319 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Viral Infections virus perturbations changing expression of LINC00319 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of LINC00319 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of LINC00319 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of LINC00319 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00319 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MiRTarBase microRNA Targets microRNAs targeting LINC00319 gene in low- or high-throughput microRNA targeting studies from the MiRTarBase microRNA Targets dataset.
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles cell types and tissues with high or low DNA methylation of LINC00319 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at LINC00319 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.
TCGA Signatures of Differentially Expressed Genes for Tumors tissue samples with high or low expression of LINC00319 gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.