| Name | long intergenic non-protein coding RNA 327 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n After reviewing the provided abstracts"}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "4"}]}, {"type": "t", "text": ", no direct mention or functional characterization of LINC00327 was identified. None of the studies describe either its expression profile, potential regulatory role, or its mechanistic contribution in disease contexts."}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n The first abstract discusses a case of copy number variation involving several genomic regions (including a 15q11.2 microdeletion associated with BurnsideāButler syndrome), but does not specify any role for LINC00327. Similarly, the second abstract focuses on Wnt signalling in neuroblastoma and its effects on differentiation and proliferation, without reporting insights into LINC00327. Finally, the third and fourth abstracts present analyses of competing endogenous RNA (ceRNA) networks in papillary renal cell carcinoma; although these investigations involve several long noncoding RNAs (lncRNAs), they do not include LINC00327 as a factor in the constructed regulatory networks.\n "}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n In summary, based on the provided abstracts there is no evidence to determine a function for LINC00327. Future studies specifically targeting LINC00327 will be necessary to define its role in any biological or pathological processes.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Adria M Jerkovich, Merlin G Butler "}, {"type": "b", "children": [{"type": "t", "text": "Further phenotypic expansion of 15q11.2 BP1-BP2 microdeletion (Burnside-Butler) syndrome."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Pediatr Genet (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3233/PGE-14082"}], "href": "https://doi.org/10.3233/PGE-14082"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25309804"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25309804"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Marianna Szemes, Alexander Greenhough, Zsombor Melegh, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Wnt Signalling Drives Context-Dependent Differentiation or Proliferation in Neuroblastoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neoplasia (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.neo.2018.01.009"}], "href": "https://doi.org/10.1016/j.neo.2018.01.009"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29505958"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29505958"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Qing Luo, Meng Cui, Qinfu Deng, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Comprehensive analysis of differentially expressed profiles and reconstruction of a competing endogenous RNA network in papillary renal cell carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Med Rep (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/mmr.2019.10138"}], "href": "https://doi.org/10.3892/mmr.2019.10138"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30957192"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30957192"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Xin Zhu, Jianyu Tan, Zongjian Liang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Comprehensive analysis of competing endogenous RNA network and 3-mRNA signature predicting survival in papillary renal cell cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Medicine (Baltimore) (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1097/MD.0000000000016672"}], "href": "https://doi.org/10.1097/MD.0000000000016672"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31348324"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31348324"}]}]}]}
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| Synonyms | NCRNA00327 |
| NCBI Gene ID | 100506697 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC00327 has 884 functional associations with biological entities spanning 4 categories (molecular profile, disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA) extracted from 16 datasets.
Click the + buttons to view associations for LINC00327 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00327 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| CCLE Cell Line Gene Expression Profiles | cell lines with high or low expression of LINC00327 gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00327 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at LINC00327 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of LINC00327 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of LINC00327 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GEO Signatures of Differentially Expressed Genes for Diseases | disease perturbations changing expression of LINC00327 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of LINC00327 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Kinase Perturbations | kinase perturbations changing expression of LINC00327 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of LINC00327 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of LINC00327 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| GTEx Tissue-Specific Aging Signatures | tissue samples with high or low expression of LINC00327 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset. | |
| GWAS Catalog SNP-Phenotype Associations | phenotypes associated with LINC00327 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00327 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of LINC00327 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at LINC00327 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |