| Name | long intergenic non-protein coding RNA 379 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n In a study investigating the role of non‐coding RNAs during osteogenic differentiation of human induced pluripotent stem cells (hiPSCs) from patients with cleidocranial dysplasia, LINC00379 was bioinformatically classified as an enhancer regulatory region (1). Its designation as an enhancer‐like ncRNA suggests that LINC00379 may participate in modulating the transcriptional landscape of key osteogenic genes, including RUNX2, thereby influencing osteoblast differentiation and bone formation. Although the study focused broadly on multiple ncRNAs, the identification of LINC00379 among enhancer regions highlights its potential involvement in the regulatory network that underpins osteogenesis."}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Akio Ooki, Shoko Onodera, Akiko Saito, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CAGE-seq analysis of osteoblast derived from cleidocranial dysplasia human induced pluripotent stem cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Bone (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bone.2020.115582"}], "href": "https://doi.org/10.1016/j.bone.2020.115582"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32795676"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32795676"}]}]}]}
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| NCBI Gene ID | 100874150 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC00379 has 181 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 6 datasets.
Click the + buttons to view associations for LINC00379 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00379 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00379 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of LINC00379 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00379 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of LINC00379 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles | cell types and tissues with high or low DNA methylation of LINC00379 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset. | |