LINC00400 Gene

Name long intergenic non-protein coding RNA 400
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC00400 is a long non‐coding RNA (lncRNA) that has recently emerged as an important player in colorectal cancer (CRC) through its role in regulating the competing endogenous RNA (ceRNA) network. In CRC, differential expression analyses have revealed that LINC00400 not only participates in the modulation of gene expression by sequestering microRNAs but also shows significant expression changes across multiple pathological stages. This dynamic expression pattern suggests that it helps govern key signaling pathways involved in tumor initiation and progression, underscoring its potential as a promising prognostic biomarker and therapeutic target for CRC. These findings contribute to the growing evidence that aberrant ceRNA networks, which include lncRNAs such as LINC00400, hold critical regulatory functions in colon tumorigenesis and disease progression."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "3"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Fengxi Li, Qian Li, Xianghua Wu "}, {"type": "b", "children": [{"type": "t", "text": "Construction and analysis for differentially expressed long non-coding RNAs and MicroRNAs mediated competing endogenous RNA network in colon cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0192494"}], "href": "https://doi.org/10.1371/journal.pone.0192494"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29420609"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29420609"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Xiaoxue Wang, Zhimin Liu, Hong Tong, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Linc01194 acts as an oncogene in colorectal carcinoma and is associated with poor survival outcome."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Manag Res (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.2147/CMAR.S189189"}], "href": "https://doi.org/10.2147/CMAR.S189189"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30962722"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30962722"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Wenliang Yuan, Xiaobo Li, Li Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Comprehensive analysis of lncRNA-associated ceRNA network in colorectal cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2018.11.151"}], "href": "https://doi.org/10.1016/j.bbrc.2018.11.151"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30503344"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30503344"}]}]}]}
NCBI Gene ID 100874159
API
Download Associations
Predicted Functions View LINC00400's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC00400's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC00400's ARCHS4 Predicted Functions.

Functional Associations

LINC00400 has 3 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 2 datasets.

Click the + buttons to view associations for LINC00400 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of LINC00400 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of LINC00400 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.