LINC00457 Gene

Name long intergenic non-protein coding RNA 457
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Recent investigations have revealed that the long non‐coding RNA LINC00467 plays an oncogenic role in glioma. Analysis from The Cancer Genome Atlas and validation in clinical samples have shown that LINC00467 is significantly upregulated in glioma tissues. Functional studies using glioma cell lines demonstrate that reducing LINC00467 levels (via siRNA knockdown) inhibits cell proliferation and invasiveness while promoting apoptosis. Mechanistically, LINC00467 appears to exert its pro‐tumorigenic effects through a negative regulatory interaction with microRNA‐485–5p, a microRNA that otherwise functions as a tumor suppressor. These findings suggest that targeting LINC00467 may represent a promising therapeutic strategy for glioma treatment (1)."}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n In parallel, the advancement of high‐performance computational resources, such as the Blacklight XSEDE large shared memory system, has enabled researchers to perform extremely challenging analyses on diverse genomic and transcriptomic datasets. These state‐of‐the‐art bioinformatics pipelines facilitate robust sequence assembly, error correction, and metagenomic studies across a wide range of biological samples. Such computational capabilities are critical for unveiling complex molecular interactions and regulatory networks—for instance, those involving non‐coding RNAs like LINC00467—in various disease contexts (2).\n "}, {"type": "rg", "children": []}]}]}
NCBI Gene ID 100874179
API
Download Associations
Predicted Functions View LINC00457's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC00457's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC00457's ARCHS4 Predicted Functions.

Functional Associations

LINC00457 has 162 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 5 datasets.

Click the + buttons to view associations for LINC00457 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00457 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00457 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of LINC00457 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00457 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of LINC00457 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.