LINC00470 Gene

Name long intergenic non-protein coding RNA 470
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC00470 has emerged as an oncogenic long noncoding RNA whose aberrant overexpression is associated with tumor progression and poor prognosis across multiple cancer types. In gastric cancer, for instance, LINC00470 is upregulated and promotes cell proliferation, migration, and invasion by associating with PTEN mRNA and reducing its stability."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In glioblastoma, LINC00470 has been reported to activate AKT signaling by forming a ternary complex with the RNA‐binding protein FUS and AKT, thereby facilitating a noncanonical pathway that enhances glycolysis and suppresses autophagy."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " Other studies in glioma further demonstrate that LINC00470 can act as a competitive endogenous RNA, sponging miR‑134 to upregulate MYC and its downstream target ABCC1, which in turn promotes proliferation, invasion, and temozolomide resistance."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " In parallel, exosomal LINC00470 isolated from glioma patients has been shown to bind miR‑580‑3p, resulting in increased expression of WEE1 and subsequent activation of the PI3K/AKT/mTOR pathway leading to reduced autophagy and enhanced proliferation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n\n "}, {"type": "p", "children": [{"type": "t", "text": "\n In melanoma, upregulation of LINC00470 fuels tumor cell proliferation and migration through activation of the transcription factor ZNF131, which in turn elevates APEX1 expression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": " Similarly, in endometrial cancer, high levels of LINC00470 promote invasiveness, migration, and angiogenesis by stimulating MYC‐dependent recruitment of DNMT3a to methylate and suppress the tumor suppressor PTEN, thus exacerbating tumor aggressiveness."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Beyond these mechanisms, LINC00470 contributes to hepatocellular carcinoma progression by interacting with the NF45/NF90 complex, which enhances the stability of cyclin E1 mRNA and drives cell cycle progression and proliferation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": " Additionally, LINC00470 has been identified as a component of metastasis‐associated ceRNA signatures in lung cancer, further underscoring its potential as a prognostic biomarker."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": " In glioblastoma, an extra layer of regulation has been noted in which LINC00470 promotes the expression of ELFN2 by sequestering miR‑101 and altering histone methylation occupancy."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Collectively, these studies reveal that LINC00470 exerts its oncogenic role through diverse molecular mechanisms—including the modulation of mRNA stability, competitive binding to microRNAs, formation of protein complexes, and epigenetic modifications—that converge on key signaling pathways such as PI3K/AKT/mTOR. This multifaceted regulation underscores the potential of LINC00470 as both a prognostic biomarker and a therapeutic target in a variety of malignancies.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Jijun Yan, Xiufang Huang, Xiongjie Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA LINC00470 promotes the degradation of PTEN mRNA to facilitate malignant behavior in gastric cancer cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2019.11.016"}], "href": "https://doi.org/10.1016/j.bbrc.2019.11.016"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31711642"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31711642"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Changhong Liu, Yan Zhang, Xiaoling She, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A cytoplasmic long noncoding RNA LINC00470 as a new AKT activator to mediate glioblastoma cell autophagy."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Hematol Oncol (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s13045-018-0619-z"}], "href": "https://doi.org/10.1186/s13045-018-0619-z"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29866190"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29866190"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Changwu Wu, Jun Su, Wenyong Long, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00470 promotes tumour proliferation and invasion, and attenuates chemosensitivity through the LINC00470/miR-134/Myc/ABCC1 axis in glioma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Mol Med (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/jcmm.15846"}], "href": "https://doi.org/10.1111/jcmm.15846"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32916774"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32916774"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Wenjia Ma, Yu Zhou, Min Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA LINC00470 in serum derived exosome: a critical regulator for proliferation and autophagy in glioma cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Cell Int (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12935-021-01825-y"}], "href": "https://doi.org/10.1186/s12935-021-01825-y"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33663509"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33663509"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Ting Huang, Yong-Jie Wang, Mi-Tao Huang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00470 accelerates the proliferation and metastasis of melanoma through promoting APEX1 expression."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Death Dis (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41419-021-03612-z"}], "href": "https://doi.org/10.1038/s41419-021-03612-z"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33875645"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33875645"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Tiezhong Yi, Yicun Song, Lingling Zuo, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00470 Stimulates Methylation of PTEN to Facilitate the Progression of Endometrial Cancer by Recruiting DNMT3a Through MYC."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Oncol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3389/fonc.2021.646217"}], "href": "https://doi.org/10.3389/fonc.2021.646217"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34249684"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34249684"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Wenwei Huang, Juntao Liu, Jijun Yan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA LINC00470 promotes proliferation through association with NF45/NF90 complex in hepatocellular carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Cell (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s13577-019-00288-8"}], "href": "https://doi.org/10.1007/s13577-019-00288-8"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31612313"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31612313"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Qing Cao, Zewen Dong, Shuzhen Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Construction of a metastasis-associated ceRNA network reveals a prognostic signature in lung cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Cell Int (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12935-020-01295-8"}], "href": "https://doi.org/10.1186/s12935-020-01295-8"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32518519"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32518519"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Changhong Liu, Haijuan Fu, Xiaoping Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00470 Coordinates the Epigenetic Regulation of ELFN2 to Distract GBM Cell Autophagy."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Ther (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.ymthe.2018.06.019"}], "href": "https://doi.org/10.1016/j.ymthe.2018.06.019"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30037656"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30037656"}]}]}]}
Synonyms C18orf2
Proteins CR002_HUMAN
NCBI Gene ID 56651
API
Download Associations
Predicted Functions View LINC00470's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC00470's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC00470's ARCHS4 Predicted Functions.

Functional Associations

LINC00470 has 738 functional associations with biological entities spanning 6 categories (molecular profile, organism, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 26 datasets.

Click the + buttons to view associations for LINC00470 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles tissues with high or low expression of LINC00470 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset.
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray tissue samples with high or low expression of LINC00470 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray dataset.
Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles tissues with high or low expression of LINC00470 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00470 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
CCLE Cell Line Gene Expression Profiles cell lines with high or low expression of LINC00470 gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset.
ChEA Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of LINC00470 gene from the CHEA Transcription Factor Binding Site Profiles dataset.
ChEA Transcription Factor Targets transcription factors binding the promoter of LINC00470 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00470 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene Mutation Profiles cell lines with LINC00470 gene mutations from the COSMIC Cell Line Gene Mutation Profiles dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at LINC00470 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of LINC00470 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of LINC00470 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GEO Signatures of Differentially Expressed Genes for Diseases disease perturbations changing expression of LINC00470 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of LINC00470 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Kinase Perturbations kinase perturbations changing expression of LINC00470 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of LINC00470 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations transcription factor perturbations changing expression of LINC00470 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Viral Infections virus perturbations changing expression of LINC00470 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of LINC00470 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of LINC00470 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
GWASdb SNP-Disease Associations diseases associated with LINC00470 gene in GWAS and other genetic association datasets from the GWASdb SNP-Disease Associations dataset.
GWASdb SNP-Phenotype Associations phenotypes associated with LINC00470 gene in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00470 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MiRTarBase microRNA Targets microRNAs targeting LINC00470 gene in low- or high-throughput microRNA targeting studies from the MiRTarBase microRNA Targets dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of LINC00470 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles cell types and tissues with high or low DNA methylation of LINC00470 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset.