| Name | long intergenic non-protein coding RNA 483 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC00483 is an oncogenic long noncoding RNA that is frequently upregulated in several cancer types and exerts its tumor‐promoting effects primarily by functioning as a competing endogenous RNA. In lung adenocarcinoma, for example, LINC00483 is elevated, and its silencing not only downregulates HOXA10 by releasing miR‑144 but also enhances radiosensitivity and reverses epithelial–mesenchymal transition (EMT)."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " Similarly, studies in lung adenocarcinoma and colorectal cancer have shown that LINC00483 sponges miR‑204‑3p, thereby modulating the expression of targets such as ETS1 or FMNL2 to promote cell proliferation, migration, and invasion."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n In cervical cancer, LINC00483 acts as a molecular sponge for miR‑508‑3p, resulting in the upregulation of RGS17 and contributing to enhanced cell proliferation, migration, invasion, and reduced apoptosis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": " In breast cancer, its overexpression—regulated by binding to IGF2BP1—further promotes tumor cell proliferation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Moreover, LINC00483 has been implicated in endometrial carcinoma, where ceRNA network analyses suggest that it may contribute to tumor progression by upregulating CCNB1 through competition with miR‑183."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": " In gastric cancer, two independent studies have revealed that LINC00483 promotes tumor growth and metastasis by sponging distinct microRNAs—for instance, modulating the miR‑490‑3p/MAPK1 axis as well as miR‑30a‑3p/SPAG9 signaling, which in turn activates MAPK signaling."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n In pancreatic ductal adenocarcinoma, upregulated LINC00483 drives progression via the miR‑19a‑3p/TBK1/MAPK cascade, underscoring its role as a promoter of cell proliferation and invasion."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": " Collectively, these studies indicate that LINC00483 contributes to tumorigenesis and aggressive clinical behavior across multiple cancer types by acting as a microRNA sponge, modulating key downstream effectors involved in cell growth, metastasis, and response to therapy.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Qing-Shan Yang, Bin Li, Ge Xu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long noncoding RNA LINC00483/microRNA-144 regulates radiosensitivity and epithelial-mesenchymal transition in lung adenocarcinoma by interacting with HOXA10."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Physiol (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jcp.27886"}], "href": "https://doi.org/10.1002/jcp.27886"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30714135"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30714135"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Yan Yan, Zhongmiao Wang, Baoli Qin "}, {"type": "b", "children": [{"type": "t", "text": "A novel long noncoding RNA, LINC00483 promotes proliferation and metastasis via modulating of FMNL2 in CRC."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2018.12.090"}], "href": "https://doi.org/10.1016/j.bbrc.2018.12.090"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30594388"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30594388"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Shengzhuang Yang, Tao Liu, Yu Sun, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The long noncoding RNA LINC00483 promotes lung adenocarcinoma progression by sponging miR-204-3p."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Mol Biol Lett (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s11658-019-0192-7"}], "href": "https://doi.org/10.1186/s11658-019-0192-7"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31889958"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31889958"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Pin Hu, Guiju Zhou, Xiaohui Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA Linc00483 accelerated tumorigenesis of cervical cancer by regulating miR-508-3p/RGS17 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Life Sci (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.lfs.2019.116789"}], "href": "https://doi.org/10.1016/j.lfs.2019.116789"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31454494"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31454494"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Y-S Qiao, J-H Zhou, B-H Jin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00483 is regulated by IGF2BP1 and participates in the progression of breast cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Eur Rev Med Pharmacol Sci (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.26355/eurrev_202102_24846"}], "href": "https://doi.org/10.26355/eurrev_202102_24846"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33629308"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33629308"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Jinhui Liu, Sipei Nie, Junya Liang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Competing endogenous RNA network of endometrial carcinoma: A comprehensive analysis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Biochem (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jcb.28831"}], "href": "https://doi.org/10.1002/jcb.28831"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31056798"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31056798"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Min Luo, Chengbai Liang "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA LINC00483 promotes gastric cancer development through regulating MAPK1 expression by sponging miR-490-3p."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biol Res (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s40659-020-00283-6"}], "href": "https://doi.org/10.1186/s40659-020-00283-6"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32293550"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32293550"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Defeng Li, Meifeng Yang, Aijun Liao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Linc00483 as ceRNA regulates proliferation and apoptosis through activating MAPKs in gastric cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Mol Med (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/jcmm.13661"}], "href": "https://doi.org/10.1111/jcmm.13661"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29761936"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29761936"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Chenming Ni, Kailian Zheng, Wenyu Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00483 promotes proliferation and metastasis through the miR-19a-3p/TBK1/MAPK axis in pancreatic ductal adenocarcinoma (PDAC)."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Ann Transl Med (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.21037/atm-22-907"}], "href": "https://doi.org/10.21037/atm-22-907"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35433983"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35433983"}]}]}]}
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| Synonyms | ANKRD40CL, C17ORF73 |
| Proteins | CQ073_HUMAN |
| NCBI Gene ID | 55018 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC00483 has 869 functional associations with biological entities spanning 7 categories (molecular profile, organism, chemical, disease, phenotype or trait, functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 37 datasets.
Click the + buttons to view associations for LINC00483 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of LINC00483 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset. | |
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray | tissue samples with high or low expression of LINC00483 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray dataset. | |
| Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of LINC00483 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset. | |
| BioGPS Cell Line Gene Expression Profiles | cell lines with high or low expression of LINC00483 gene relative to other cell lines from the BioGPS Cell Line Gene Expression Profiles dataset. | |
| BioGPS Human Cell Type and Tissue Gene Expression Profiles | cell types and tissues with high or low expression of LINC00483 gene relative to other cell types and tissues from the BioGPS Human Cell Type and Tissue Gene Expression Profiles dataset. | |
| CCLE Cell Line Gene Expression Profiles | cell lines with high or low expression of LINC00483 gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset. | |
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of LINC00483 gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of LINC00483 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| ChEA Transcription Factor Targets 2022 | transcription factors binding the promoter of LINC00483 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets 2022 dataset. | |
| CMAP Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of LINC00483 gene from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00483 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| dbGAP Gene-Trait Associations | traits associated with LINC00483 gene in GWAS and other genetic association datasets from the dbGAP Gene-Trait Associations dataset. | |
| DisGeNET Gene-Disease Associations | diseases associated with LINC00483 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Disease Associations dataset. | |
| DisGeNET Gene-Phenotype Associations | phenotypes associated with LINC00483 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Phenoptype Associations dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at LINC00483 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of LINC00483 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of LINC00483 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GeneSigDB Published Gene Signatures | PubMedIDs of publications reporting gene signatures containing LINC00483 from the GeneSigDB Published Gene Signatures dataset. | |
| GEO Signatures of Differentially Expressed Genes for Diseases | disease perturbations changing expression of LINC00483 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of LINC00483 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Kinase Perturbations | kinase perturbations changing expression of LINC00483 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of LINC00483 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations | transcription factor perturbations changing expression of LINC00483 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Viral Infections | virus perturbations changing expression of LINC00483 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of LINC00483 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GWASdb SNP-Disease Associations | diseases associated with LINC00483 gene in GWAS and other genetic association datasets from the GWASdb SNP-Disease Associations dataset. | |
| GWASdb SNP-Phenotype Associations | phenotypes associated with LINC00483 gene in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of LINC00483 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00483 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| LINCS L1000 CMAP CRISPR Knockout Consensus Signatures | gene perturbations changing expression of LINC00483 gene from the LINCS L1000 CMAP CRISPR Knockout Consensus Signatures dataset. | |
| LOCATE Predicted Protein Localization Annotations | cellular components predicted to contain LINC00483 protein from the LOCATE Predicted Protein Localization Annotations dataset. | |
| MiRTarBase microRNA Targets | microRNAs targeting LINC00483 gene in low- or high-throughput microRNA targeting studies from the MiRTarBase microRNA Targets dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of LINC00483 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of LINC00483 gene from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations | gene perturbations changing expression of LINC00483 gene from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at LINC00483 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |
| TCGA Signatures of Differentially Expressed Genes for Tumors | tissue samples with high or low expression of LINC00483 gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset. | |