LINC00506 Gene

Name long intergenic non-protein coding RNA 506
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Recent investigations have revealed that the long noncoding RNA LINC00506 plays a multifaceted role in cancers of the thyroid and liver. In papillary thyroid carcinoma, LINC00506 is notably downregulated and forms part of a broader diagnostic RNA panel that includes various other lncRNAs and microRNAs. In particular, LINC00506 participates in a competing endogenous RNA network with MMRN1 and hsa‐miR‐4709-3p, implying a role in the regulation of cell adhesion and endothelial cell migration—processes that are critical for tumor development and metastasis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " Similarly, in the context of hepatitis B virus-related hepatocellular carcinoma, LINC00506 is identified as one of eight lncRNAs forming a prognostic signature for overall survival. Here, its significant coexpression with ANLN and inclusion in a risk score model underscore its potential involvement in cell cycle regulation and tumor progression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " Collectively, these findings suggest that LINC00506 holds promise not only as a diagnostic and prognostic biomarker but also as a potential contributor to the modulation of tumorigenic pathways across different cancer types.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Kwang-Sig Lee, Hyuntae Park "}, {"type": "b", "children": [{"type": "t", "text": "Machine learning on thyroid disease: a review."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Biosci (Landmark Ed) (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.31083/j.fbl2703101"}], "href": "https://doi.org/10.31083/j.fbl2703101"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35345333"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35345333"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Fei Yang, Jie Zhang, Baokun Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of Potential lncRNAs and miRNAs as Diagnostic Biomarkers for Papillary Thyroid Carcinoma Based on Machine Learning."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int J Endocrinol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1155/2021/3984463"}], "href": "https://doi.org/10.1155/2021/3984463"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34335744"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34335744"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Xiaonan Zhao, Zhenzi Bai, Chenghua Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of a Novel Eight-lncRNA Prognostic Signature for HBV-HCC and Analysis of Their Functions Based on Coexpression and ceRNA Networks."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biomed Res Int (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1155/2020/8765461"}], "href": "https://doi.org/10.1155/2020/8765461"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32382578"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32382578"}]}]}]}
NCBI Gene ID 100846978
API
Download Associations
Predicted Functions View LINC00506's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC00506's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC00506's ARCHS4 Predicted Functions.

Functional Associations

LINC00506 has 6 functional associations with biological entities spanning 3 categories (organism, disease, phenotype or trait, cell line, cell type or tissue) extracted from 3 datasets.

Click the + buttons to view associations for LINC00506 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
GEO Signatures of Differentially Expressed Genes for Viral Infections virus perturbations changing expression of LINC00506 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset.
GTEx Tissue-Specific Aging Signatures tissue samples with high or low expression of LINC00506 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset.
GWAS Catalog SNP-Phenotype Associations phenotypes associated with LINC00506 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations dataset.