| Name | long intergenic non-protein coding RNA 518 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC00518 is a long intergenic non‐coding RNA that is frequently upregulated in a variety of tumors—including breast, melanoma, prostate, cervical, lung, and colorectal cancers—and functions predominantly as an oncogene by modulating multiple cancer hallmarks. In breast cancer, for example, LINC00518 contributes to chemoresistance by acting as a competing endogenous RNA (ceRNA) that sponges miR‐199a, thereby leading to the upregulation of the drug efflux transporter MRP1 and reduced sensitivity to several chemotherapeutic agents (↗."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In melanoma, increased LINC00518 levels promote cell growth, invasion, metastasis, and even radioresistance by sequestering miR‐204‐5p and miR‐33a‐3p, which in turn modulate targets such as AP1S2 and the HIF‐1α/lactate dehydrogenase A axis (↗."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "2", "end_ref": "4"}]}, {"type": "t", "text": " Similarly, in prostate cancer, LINC00518 impairs the function of miR‐216b‐5p, leading to the dysregulation of factors such as GATA6, which is associated with paclitaxel resistance (↗"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": ", while in cervical cancer it stimulates the activation of the JAK/STAT3 pathway and promotes epithelial–mesenchymal transition (EMT) to enhance proliferation and metastasis (↗."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": " In breast cancer progression, LINC00518 also promotes CDX2 methylation via activation of the Wnt signaling pathway, thereby driving tumor cell proliferation and reducing apoptosis (↗."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n In addition to its functional roles in driving oncogenesis and drug resistance, LINC00518 serves as an important biomarker in noninvasive molecular diagnostics. Several studies have incorporated LINC00518 into gene expression assays—most notably in the pigmented lesion assay—which, in combination with PRAME, distinguishes melanoma from benign pigmented lesions with high sensitivity and specificity (↗."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "8", "end_ref": "14"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Furthermore, in lung cancers—including non‐small cell lung cancer (NSCLC) and lung adenocarcinoma (LUAD)—LINC00518 is integrated within broader ceRNA regulatory networks where it modulates cell proliferation, migration, and invasion via interactions with microRNAs such as miR‐216b‐5p, miR‐335-3p, and others, contributing to aggressive tumor behavior and serving as a potential prognostic biomarker (↗."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "15", "end_ref": "20"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Notably, a single nucleotide polymorphism within LINC00518 has also been linked to modulating behavioral traits such as social disinhibition, indicating that its biological influence may extend beyond cancer (↗."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "21"}]}, {"type": "t", "text": " Collectively, these findings underscore the multifaceted oncogenic functions of LINC00518—mediated largely via its ceRNA activity—and highlight its promise as both a diagnostic marker and therapeutic target across multiple malignancies.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Liang Chang, Zhuang Hu, Zhenyu Zhou, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Linc00518 Contributes to Multidrug Resistance Through Regulating the MiR-199a/MRP1 Axis in Breast Cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Physiol Biochem (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1159/000491659"}], "href": "https://doi.org/10.1159/000491659"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30001527"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30001527"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Wenkang Luan, Yuting Ding, Shaojun Ma, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long noncoding RNA LINC00518 acts as a competing endogenous RNA to promote the metastasis of malignant melanoma via miR-204-5p/AP1S2 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Death Dis (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41419-019-2090-3"}], "href": "https://doi.org/10.1038/s41419-019-2090-3"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31712557"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31712557"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Yan Liu, Dong He, Mengqing Xiao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long noncoding RNA LINC00518 induces radioresistance by regulating glycolysis through an miR-33a-3p/HIF-1α negative feedback loop in melanoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Death Dis (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41419-021-03523-z"}], "href": "https://doi.org/10.1038/s41419-021-03523-z"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33664256"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33664256"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Jie Xu, Fan Zhang, Manman Lin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00518 affects the proliferation, invasion and migration of cutaneous malignant melanoma cells via miR-526b-3p/EIF5A2 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Acta Biochim Pol (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.18388/abp.2020_5746"}], "href": "https://doi.org/10.18388/abp.2020_5746"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35189053"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35189053"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Junhui He, Mingchong Sun, Huaizhen Geng, et al. 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| Synonyms | C6ORF218 |
| Proteins | CF218_HUMAN |
| NCBI Gene ID | 221718 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC00518 has 907 functional associations with biological entities spanning 7 categories (molecular profile, organism, disease, phenotype or trait, chemical, functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 24 datasets.
Click the + buttons to view associations for LINC00518 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray | tissue samples with high or low expression of LINC00518 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00518 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| CCLE Cell Line Gene Expression Profiles | cell lines with high or low expression of LINC00518 gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset. | |
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of LINC00518 gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of LINC00518 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00518 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at LINC00518 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of LINC00518 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of LINC00518 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GEO Signatures of Differentially Expressed Genes for Diseases | disease perturbations changing expression of LINC00518 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of LINC00518 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Kinase Perturbations | kinase perturbations changing expression of LINC00518 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of LINC00518 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations | transcription factor perturbations changing expression of LINC00518 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Viral Infections | virus perturbations changing expression of LINC00518 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of LINC00518 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GWASdb SNP-Disease Associations | diseases associated with LINC00518 gene in GWAS and other genetic association datasets from the GWASdb SNP-Disease Associations dataset. | |
| GWASdb SNP-Phenotype Associations | phenotypes associated with LINC00518 gene in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of LINC00518 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00518 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| LOCATE Predicted Protein Localization Annotations | cellular components predicted to contain LINC00518 protein from the LOCATE Predicted Protein Localization Annotations dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of LINC00518 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at LINC00518 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |
| TCGA Signatures of Differentially Expressed Genes for Tumors | tissue samples with high or low expression of LINC00518 gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset. | |