| Name | long intergenic non-protein coding RNA 556 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n In a study investigating prognostic biomarkers for hepatocellular carcinoma (HCC), LINC00556 was identified as one of four long noncoding RNAs (lncRNAs) that together form a signature capable of stratifying HCC patients into distinct prognostic groups. The analysis, conducted on a training set of 90 patients and validated on an independent set, revealed that the four‐lncRNA signature—including LINC00556—was significantly associated with overall survival. Patients classified into different risk groups exhibited markedly different median survival times, and multivariate Cox analysis confirmed that this lncRNA signature served as an independent predictor of HCC prognosis. Although LINC00556’s precise biological mechanisms were not elucidated in the study, its inclusion in the prognostic model underscores its potential clinical utility as a biomarker for assessing patient risk."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Haitao Jiang, Lianhe Zhao, Yunjie Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A four-long noncoding RNA signature predicts survival of hepatocellular carcinoma patients."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Clin Lab Anal (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jcla.23377"}], "href": "https://doi.org/10.1002/jcla.23377"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32474975"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32474975"}]}]}]}
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| NCBI Gene ID | 100861551 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC00556 has 14 functional associations with biological entities spanning 5 categories (organism, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 5 datasets.
Click the + buttons to view associations for LINC00556 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| GEO Signatures of Differentially Expressed Genes for Diseases | disease perturbations changing expression of LINC00556 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of LINC00556 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of LINC00556 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GEO Signatures of Differentially Expressed Genes for Viral Infections | virus perturbations changing expression of LINC00556 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of LINC00556 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |