LINC00564 Gene

Name long intergenic non-protein coding RNA 564
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nThe central nervous system’s response to neural injury involves marked plasticity, as evidenced by the increased sprouting of nociceptive afferents and alterations in their synaptic terminations. In the study summarized"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ", cutaneous nociceptive A and C fibers were differentially labeled and analyzed using synaptic markers, which provided a clear depiction of synaptic protein expression patterns in the dorsal horn.\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nSpecifically, the investigation demonstrated that while CTB-labeled A fibers expressed synaptophysin exclusively, IB4-binding C fibers exhibited comparable expression levels of both synaptophysin and its isoform, synaptoporin, reflecting distinct synaptic termination profiles. Although the study offered critical insights into the molecular underpinnings of nociceptive transmission and plasticity, it did not directly address or describe functional roles for noncoding RNAs such as LINC00564."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn summary, while the research highlights the complexity of synaptic connectivity and functional modulation in response to neural injury, no direct evidence regarding the function of LINC00564 was reported. This gap underscores the need for future studies to explore whether noncoding RNAs like LINC00564 may contribute to the regulation of synaptic changes and nociceptive signaling observed in neuropathic conditions."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Jumi Chung, John F Franklin, Hyun Joon Lee "}, {"type": "b", "children": [{"type": "t", "text": "Central expression of synaptophysin and synaptoporin in nociceptive afferent subtypes in the dorsal horn."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41598-019-40967-y"}], "href": "https://doi.org/10.1038/s41598-019-40967-y"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30862809"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30862809"}]}]}]}
NCBI Gene ID 100861546
API
Download Associations
Predicted Functions View LINC00564's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC00564's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC00564's ARCHS4 Predicted Functions.

Functional Associations

LINC00564 has 11 functional associations with biological entities spanning 3 categories (disease, phenotype or trait, chemical, gene, protein or microRNA) extracted from 5 datasets.

Click the + buttons to view associations for LINC00564 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
GEO Signatures of Differentially Expressed Genes for Diseases disease perturbations changing expression of LINC00564 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of LINC00564 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Kinase Perturbations kinase perturbations changing expression of LINC00564 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of LINC00564 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations transcription factor perturbations changing expression of LINC00564 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset.