LINC00566 Gene

Name long intergenic non-protein coding RNA 566
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC00566 is a long non‐coding RNA identified as part of a three‐lncRNA signature that robustly stratifies ovarian cancer patients into high‐risk and low‐risk groups based on overall survival outcomes."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In the study, LINC00566—along with KB-1836B5 and FAM27L—was selected from a set of 112 differentially expressed lncRNAs derived from The Cancer Genome Atlas data. The prognostic signature was shown to be independent of other clinical variables and its associated genes participated in metabolic processes and several key signaling pathways, including mechanistic target of rapamycin (mTOR) signaling, ubiquitin-mediated proteolysis, and the complement and coagulation cascades pathways. These findings suggest that LINC00566 may play a role in the regulation of oncogenic processes in ovarian cancer, thereby serving as a promising molecular biomarker for survival prediction."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Huijian Li, Mi Gong, Min Zhao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNAs KB-1836B5, LINC00566 and FAM27L are associated with the survival time of patients with ovarian cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncol Lett (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/ol.2018.9143"}], "href": "https://doi.org/10.3892/ol.2018.9143"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30127984"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30127984"}]}]}]}
NCBI Gene ID 100861547
API
Download Associations
Predicted Functions View LINC00566's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC00566's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC00566's ARCHS4 Predicted Functions.

Functional Associations

LINC00566 has 7 functional associations with biological entities spanning 3 categories (disease, phenotype or trait, chemical, gene, protein or microRNA) extracted from 4 datasets.

Click the + buttons to view associations for LINC00566 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
GEO Signatures of Differentially Expressed Genes for Diseases disease perturbations changing expression of LINC00566 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of LINC00566 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of LINC00566 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations transcription factor perturbations changing expression of LINC00566 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset.