| Name | long intergenic non-protein coding RNA 595 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Long intergenic non‐coding RNA LINC00595 has been identified as a stimulus‐specific immunomodulatory factor in monocytes during fungal infections. In particular, exposure to fungal pathogens such as "}, {"type": "i", "children": [{"type": "t", "text": "Candida albicans"}]}, {"type": "t", "text": " and "}, {"type": "i", "children": [{"type": "t", "text": "Aspergillus fumigatus"}]}, {"type": "t", "text": " triggers massive fold changes in LINC00595 expression, suggesting that it may serve as an early biomarker of infection and a potential therapeutic target through its regulation of chemokine and cytokine signaling, a process that is further modulated by vitamins A and D."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " Although other studies have explored dysregulation of long non‑coding RNAs in diverse pathological settings – for example, the involvement of non‐coding RNAs in ceRNA networks related to autophagy regulation in pancreatic cancer"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "and the dysregulated expression profile of lncRNAs associated with tumorigenesis in thyroid cancer"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "– LINC00595 emerges as a promising candidate specifically in the context of immunomodulatory responses during fungal infections.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Konstantin Riege, Martin Hölzer, Tilman E Klassert, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Massive Effect on LncRNAs in Human Monocytes During Fungal and Bacterial Infections and in Response to Vitamins A and D."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/srep40598"}], "href": "https://doi.org/10.1038/srep40598"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28094339"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28094339"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Dan-Ming Wei, Meng-Tong Jiang, Peng Lin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Potential ceRNA networks involved in autophagy suppression of pancreatic cancer caused by chloroquine diphosphate: A study based on differentially‑expressed circRNAs, lncRNAs, miRNAs and mRNAs."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int J Oncol (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/ijo.2018.4660"}], "href": "https://doi.org/10.3892/ijo.2018.4660"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30570107"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30570107"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Wei Lu, Yongcan Xu, Jiewei Xu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of differential expressed lncRNAs in human thyroid cancer by a genome-wide analyses."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Med (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/cam4.1627"}], "href": "https://doi.org/10.1002/cam4.1627"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29923329"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29923329"}]}]}]}
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| Synonyms | C10ORF101 |
| NCBI Gene ID | 414243 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC00595 has 226 functional associations with biological entities spanning 3 categories (disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA) extracted from 6 datasets.
Click the + buttons to view associations for LINC00595 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00595 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| DISEASES Experimental Gene-Disease Association Evidence Scores | diseases associated with LINC00595 gene in GWAS datasets from the DISEASES Experimental Gene-Disease Assocation Evidence Scores dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of LINC00595 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of LINC00595 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of LINC00595 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles | cell types and tissues with high or low DNA methylation of LINC00595 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset. | |