| Name | long intergenic non-protein coding RNA 630 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC00630 is a long non‐coding RNA that has emerged as a multifunctional regulator in several pathological conditions, especially in various cancers. In non‐small‐cell lung cancer, LINC00630 is markedly upregulated and promotes tumor proliferation and metastasis through its interaction with proteins such as DDX23 and by stabilizing HDAC1, thereby influencing downstream signaling pathways critical for tumor progression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In hepatocellular carcinoma, the oncogenic effects of LINC00630 are mediated by its direct binding to the transcription factor E2F1, which enhances the transcription of CDK2 and facilitates cell cycle progression, resulting in increased tumor cell proliferation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Beyond its role in malignancies, LINC00630 is also implicated in other pathological contexts. It is part of a competing endogenous RNA network identified in studies of irreversible pulpitis, suggesting its contribution to inflammatory and regulatory processes."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " In colon carcinoma, LINC00630 functions as a molecular sponge for miR-409-3p, leading to upregulation of hexokinase 2 (HK2), which in turn promotes glycolysis, cell growth, and resistance to apoptosis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": " Similarly, in cholangiocarcinoma LINC00630 promotes proliferation, migration, and invasion by sponging miR-199a and thereby upregulating fibroblast growth factor 7 (FGF7)."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n LINC00630’s clinical relevance is further underscored by its inclusion in an eight-lncRNA prognostic signature for childhood acute lymphoblastic leukemia, highlighting its potential as a prognostic biomarker."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": " Additionally, its association with radiotherapy response—being one of several lncRNAs whose expression correlates with treatment outcomes—reflects its broader involvement in determining radiosensitivity."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": " In colorectal cancer, elevated levels of LINC00630 contribute to radioresistance by associating with EZH2 to epigenetically repress the expression of BEX1, thus diminishing apoptosis and supporting tumor cell survival upon irradiation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Collectively, these findings indicate that LINC00630 plays diverse oncogenic roles—ranging from promoting cell proliferation, migration, and metabolic reprogramming to modulating treatment resistance—through interactions with transcription factors, epigenetic modifiers, and microRNAs. Its multifaceted functions and consistent upregulation in multiple disease contexts make it a promising molecular target for diagnostic, prognostic, and therapeutic strategies.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Guozhang Mao, Hui Jin, Liuguang Wu "}, {"type": "b", "children": [{"type": "t", "text": "DDX23-Linc00630-HDAC1 axis activates the Notch pathway to promote metastasis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncotarget (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.18632/oncotarget.17156"}], "href": "https://doi.org/10.18632/oncotarget.17156"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28473661"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28473661"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Jian Kang, Xu Huang, Weiguo Dong, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA LINC00630 facilitates hepatocellular carcinoma progression through recruiting transcription factor E2F1 to up-regulate cyclin-dependent kinase 2 expression."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Exp Toxicol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1177/09603271211038744"}], "href": "https://doi.org/10.1177/09603271211038744"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34420405"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34420405"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Xiaoxi Xi, Yihong Ma, Yuzhen Xu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The Genetic and Epigenetic Mechanisms Involved in Irreversible Pulp Neural Inflammation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Dis Markers (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1155/2021/8831948"}], "href": "https://doi.org/10.1155/2021/8831948"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33777260"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33777260"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Jian Chen, Runjie Wang, Enci Lu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00630 as a miR-409-3p sponge promotes apoptosis and glycolysis of colon carcinoma cells via regulating HK2."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Transl Res (2022)"}]}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35273690"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35273690"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Baiyin Zhong, Caixin Song, Qingfang He, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00630 promotes cholangiocarcinoma cell proliferation, migration and invasion by mediating the miR-199a/FGF7 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cancer (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.7150/jca.66850"}], "href": "https://doi.org/10.7150/jca.66850"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35154463"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35154463"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Zhang Chen, Fan Yang, Hui Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of a nomogram based on an 8-lncRNA signature as a novel diagnostic biomarker for childhood acute lymphoblastic leukemia."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Aging (Albany NY) (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.18632/aging.203116"}], "href": "https://doi.org/10.18632/aging.203116"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34106877"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34106877"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Kaveh Ebahimzadeh, Hamed Shoorei, Seyed Ali Mousavinejad, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Emerging role of non-coding RNAs in response of cancer cells to radiotherapy."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Pathol Res Pract (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.prp.2020.153327"}], "href": "https://doi.org/10.1016/j.prp.2020.153327"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33422780"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33422780"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Feng Liu, Weifeng Huang, Jinsheng Hong, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long noncoding RNA LINC00630 promotes radio-resistance by regulating BEX1 gene methylation in colorectal cancer cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "IUBMB Life (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/iub.2263"}], "href": "https://doi.org/10.1002/iub.2263"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32119177"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32119177"}]}]}]}
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| Synonyms | LL0XNC01-157D4.1, LL0XNC01-237H1.2 |
| NCBI Gene ID | 100287765 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC00630 has 796 functional associations with biological entities spanning 2 categories (functional term, phrase or reference, cell line, cell type or tissue) extracted from 8 datasets.
Click the + buttons to view associations for LINC00630 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq | tissue samples with high or low expression of LINC00630 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00630 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00630 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| GeneSigDB Published Gene Signatures | PubMedIDs of publications reporting gene signatures containing LINC00630 from the GeneSigDB Published Gene Signatures dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of LINC00630 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of LINC00630 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00630 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles | cell lines with high or low expression of LINC00630 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset. | |