| Name | long intergenic non-protein coding RNA 632 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC00632, a long non‐coding RNA, has emerged as a critical regulatory hub that modulates both circular RNA biogenesis and microRNA activity in diverse disease contexts. In melanoma, for example, epigenetic silencing of LINC00632 suppresses production of its derivative circRNA (CDR1as/ciRS-7), thereby promoting invasion and metastasis through an IGF2BP3‐mediated, miR-7–independent mechanism."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "3"}]}, {"type": "t", "text": "\n In non–small cell lung cancer, reduced LINC00632 expression correlates with enhanced lymph node metastasis, distant spread, and poor prognosis, while its overexpression impairs cell proliferation and migration by negatively regulating miR-1203."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Beyond its oncologic roles, LINC00632 functions as an important immunomodulator in allergic rhinitis. In nasal epithelial cells, it is downregulated upon IL-13 stimulation, and its overexpression counteracts IL-13–induced production of pro-inflammatory cytokines by interacting with EZH2 to repress GATA-3 and by targeting miR-498."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Integrative transcriptomic analyses have further implicated LINC00632 as a prognostic marker in both neuroblastoma and tamoxifen-treated breast cancer, thereby linking its expression to overall patient survival and therapeutic response."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": "\n Moreover, genomic deletions that encompass LINC00632—as observed in hemophilia B patients with intellectual disability—suggest that loss of this locus may contribute to broader developmental phenotypes"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": ", while analyses of competitive endogenous RNA networks in intrauterine adhesion indicate potential additional regulatory roles."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "11"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Collectively, these findings highlight LINC00632 as a multifunctional RNA that, through epigenetic modulation and interactions with various RNA species and chromatin regulators, acts as a tumor suppressor and immune regulator. Its diverse roles in controlling metastasis, therapeutic response, and inflammatory processes underscore its potential as both a prognostic biomarker and a candidate therapeutic target.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Douglas Hanniford, Alejandro Ulloa-Morales, Alcida Karz, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Epigenetic Silencing of CDR1as Drives IGF2BP3-Mediated Melanoma Invasion and Metastasis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Cell (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.ccell.2019.12.007"}], "href": "https://doi.org/10.1016/j.ccell.2019.12.007"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31935372"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31935372"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Steven P Barrett, Kevin R Parker, Caroline Horn, et al. "}, {"type": "b", "children": [{"type": "t", "text": "ciRS-7 exonic sequence is embedded in a long non-coding RNA locus."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS Genet (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pgen.1007114"}], "href": "https://doi.org/10.1371/journal.pgen.1007114"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29236709"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29236709"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Theresa Jakobsen, Mette Dahl, Konstantinos Dimopoulos, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Genome-Wide Circular RNA Expression Patterns Reflect Resistance to Immunomodulatory Drugs in Multiple Myeloma Cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancers (Basel) (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3390/cancers13030365"}], "href": "https://doi.org/10.3390/cancers13030365"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33498476"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33498476"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Tianwen Luo, Liping Yan, Hua Liu "}, {"type": "b", "children": [{"type": "t", "text": "LINC00632 inhibits the malignant development of non-small cell lung cancer by downregulating miR-1203."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J BUON (2020)"}]}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32862599"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32862599"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Wei Li, Cui-Yun Cai, Jun-Jie Zeng "}, {"type": "b", "children": [{"type": "t", "text": "Mesenchymal Stem Cell-Derived Exosome-Containing Linc00632 Regulates GATA Binding Protein-3 Expression in Allergic Rhinitis by Interacting with Enhancer of Zeste Homolog 2 to Inhibit T Helper Cell 2 Differentiation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int Arch Allergy Immunol (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1159/000518950"}], "href": "https://doi.org/10.1159/000518950"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34537772"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34537772"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Liyan Yue, Xiaoyan Yin, Fang Hao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long Noncoding RNA Linc00632 Inhibits Interleukin-13-Induced Inflammatory Cytokine and Mucus Production in Nasal Epithelial Cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Innate Immun (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1159/000500420"}], "href": "https://doi.org/10.1159/000500420"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31315126"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31315126"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Martin Porsch, Esra Özdemir, Martin Wisniewski, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Time resolved gene expression analysis during tamoxifen adaption of MCF-7 cells identifies long non-coding RNAs with prognostic impact."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "RNA Biol (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1080/15476286.2019.1581597"}], "href": "https://doi.org/10.1080/15476286.2019.1581597"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30760083"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30760083"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Srinivasulu Yerukala Sathipati, Divya Sahu, Hsuan-Cheng Huang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification and characterization of the lncRNA signature associated with overall survival in patients with neuroblastoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41598-019-41553-y"}], "href": "https://doi.org/10.1038/s41598-019-41553-y"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30914706"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30914706"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Y Jourdy, N Chatron, M-L Carage, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Study of six patients with complete F9 deletion characterized by cytogenetic microarray: role of the SOX3 gene in intellectual disability."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Thromb Haemost (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/jth.13430"}], "href": "https://doi.org/10.1111/jth.13430"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27477789"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27477789"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "V Tasic, A Mitrotti, F G Riepe, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Duplication of The "}, {"type": "a", "children": [{"type": "t", "text": "i"}], "href": "i"}, {"type": "t", "text": "SOX3"}, {"type": "a", "children": [{"type": "t", "text": "/i"}], "href": "/i"}, {"type": "t", "text": " Gene in an Sry-negative 46,XX Male with Associated Congenital Anomalies of Kidneys and the Urinary Tract: Case Report and Review of the Literature."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Balkan J Med Genet (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.2478/bjmg-2019-0006"}], "href": "https://doi.org/10.2478/bjmg-2019-0006"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31523625"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31523625"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Jingni Zhang, Peng Jiang, Yuan Tu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification and validation of long non-coding RNA associated ceRNAs in intrauterine adhesion."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Bioengineered (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1080/21655979.2021.2017578"}], "href": "https://doi.org/10.1080/21655979.2021.2017578"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34968168"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34968168"}]}]}]}
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| Synonyms | ASINC |
| NCBI Gene ID | 286411 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC00632 has 957 functional associations with biological entities spanning 3 categories (functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 14 datasets.
Click the + buttons to view associations for LINC00632 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of LINC00632 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset. | |
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq | tissue samples with high or low expression of LINC00632 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset. | |
| Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of LINC00632 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00632 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00632 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of LINC00632 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of LINC00632 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of LINC00632 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| GTEx Tissue-Specific Aging Signatures | tissue samples with high or low expression of LINC00632 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset. | |
| HPA Tissue Gene Expression Profiles | tissues with high or low expression of LINC00632 gene relative to other tissues from the HPA Tissue Gene Expression Profiles dataset. | |
| HPA Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of LINC00632 gene relative to other tissue samples from the HPA Tissue Sample Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00632 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| LOCATE Predicted Protein Localization Annotations | cellular components predicted to contain LINC00632 protein from the LOCATE Predicted Protein Localization Annotations dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of LINC00632 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |