| Name | long intergenic non-protein coding RNA 636 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Recent studies have implicated the long non‐coding RNA LINC00636 in diverse pathological processes across multiple organ systems. In patients with atrial fibrillation and myocardial fibrosis, LINC00636 was identified as having a regulatory relationship with miR‑450a‑2‑3p – suggesting a potential role in modulating fibrotic responses, possibly through TGF‑β–related pathways."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In HER‑2–enriched subtype breast cancer, network analyses have highlighted LINC00636 as one of the core genes co‐expressed with other lncRNAs and mRNAs implicated in key signaling cascades such as MAPK and PI3K‑Akt, indicating its possible involvement in tumor progression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " Moreover, in cervical cancer, elevated serum and tumor levels of LINC00636 were associated with metastasis; functional experiments revealed that knockdown of LINC00636 suppressed cell invasion and proliferation, likely by alleviating its inhibitory effect on the metastasis‐suppressor gene NM23."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " Finally, in pancreatic ductal adenocarcinoma, LINC00636 emerged as a component of a prognostic lncRNA–mRNA panel linked to pathways such as cell adhesion and proteolysis, suggesting its utility as a biomarker and hinting at a functional role in the molecular pathogenesis of this aggressive cancer."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Langsha Liu, Fanyan Luo, Kaibo Lei "}, {"type": "b", "children": [{"type": "t", "text": "Exosomes Containing LINC00636 Inhibit MAPK1 through the miR-450a-2-3p Overexpression in Human Pericardial Fluid and Improve Cardiac Fibrosis in Patients with Atrial Fibrillation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mediators Inflamm (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1155/2021/9960241"}], "href": "https://doi.org/10.1155/2021/9960241"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34257520"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34257520"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Fan Yang, Shixu Lyu, Siyang Dong, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Expression profile analysis of long noncoding RNA in HER-2-enriched subtype breast cancer by next-generation sequencing and bioinformatics."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Onco Targets Ther (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.2147/OTT.S97664"}], "href": "https://doi.org/10.2147/OTT.S97664"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26929647"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26929647"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Yue Zhong, Qiang Lu, Wei Qiu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00636 promotes lymph node metastasis and cervical cancer through targeting NM23."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biosci Rep (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1042/BSR20200367"}], "href": "https://doi.org/10.1042/BSR20200367"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33034616"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33034616"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Yingcheng Wu, Jinhuan Wei, Yue Ming, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Orchestrating a biomarker panel with lncRNAs and mRNAs for predicting survival in pancreatic ductal adenocarcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Biochem (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jcb.27119"}], "href": "https://doi.org/10.1002/jcb.27119"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29923223"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29923223"}]}]}]}
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| NCBI Gene ID | 285205 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC00636 has 182 functional associations with biological entities spanning 4 categories (organism, disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA) extracted from 8 datasets.
Click the + buttons to view associations for LINC00636 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00636 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| GEO Signatures of Differentially Expressed Genes for Diseases | disease perturbations changing expression of LINC00636 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of LINC00636 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Viral Infections | virus perturbations changing expression of LINC00636 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of LINC00636 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00636 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of LINC00636 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles | cell types and tissues with high or low DNA methylation of LINC00636 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset. | |