| Name | long intergenic non-protein coding RNA 663 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Recent studies have begun to elucidate the role of the long intergenic non‐coding RNA LINC00663 in cancer. In glioma, for example, LINC00663 is significantly overexpressed in tumor tissues and cell lines compared with normal brain tissues and human astrocytes. High LINC00663 levels correlate with reduced overall survival, and experimental knockdown of LINC00663 markedly inhibits cell proliferation, migration, and invasion, an effect that appears to be mediated via downregulation of the AKT/mTOR signaling pathway."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In addition, analyses across various human tissues and cancer cell lines reveal that LINC00663 expression is notably prominent in the thyroid and uterus while being much lower in skeletal muscle, suggesting potential tissue‐specific functions. Furthermore, the discovery of multiple splice variants and a novel exonic region within LINC00663 indicates that its secondary structure and interaction with microRNAs are subject to complex regulation, which may contribute to its role in cancer biology."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " While additional studies—such as those focusing on uterine leiomyomata and breast cancer—have underscored the importance of comprehensive molecular signatures and the involvement of non‐coding RNAs in tumor pathogenesis"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": ", the current findings collectively suggest that LINC00663 may exert a cancer‐promoting role by modulating key signaling pathways and through diverse regulatory mechanisms. Further investigations are warranted to fully elucidate its functional contributions across different malignancies.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Meichen Pan, Jingren Shi, Shangqi Yin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The Effect and Mechanism of LINC00663 on the Biological Behavior of Glioma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neurochem Res (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s11064-021-03311-3"}], "href": "https://doi.org/10.1007/s11064-021-03311-3"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33830405"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33830405"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Esra Bozgeyik, Yusuf Ziya Igci, Mevan F Sami Jacksi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A novel variable exonic region and differential expression of LINC00663 non-coding RNA in various cancer cell lines and normal human tissue samples."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Tumour Biol (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s13277-015-4782-3"}], "href": "https://doi.org/10.1007/s13277-015-4782-3"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26743782"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26743782"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Jennelle C Hodge, Peter J Park, Jonathan M Dreyfuss, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identifying the molecular signature of the interstitial deletion 7q subgroup of uterine leiomyomata using a paired analysis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Genes Chromosomes Cancer (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/gcc.20692"}], "href": "https://doi.org/10.1002/gcc.20692"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19603527"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19603527"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Bita Hassani, Mohammad Taheri, Yazdan Asgari, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Expression Analysis of Long Non-Coding RNAs Related With FOXM1, GATA3, FOXA1 and ESR1 in Breast Tissues."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Oncol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3389/fonc.2021.671418"}], "href": "https://doi.org/10.3389/fonc.2021.671418"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34094972"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34094972"}]}]}]}
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| NCBI Gene ID | 284440 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC00663 has 876 functional associations with biological entities spanning 6 categories (organism, functional term, phrase or reference, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 16 datasets.
Click the + buttons to view associations for LINC00663 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of LINC00663 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset. | |
| Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of LINC00663 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00663 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00663 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| GeneRIF Biological Term Annotations | biological terms co-occuring with LINC00663 gene in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Diseases | disease perturbations changing expression of LINC00663 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of LINC00663 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Kinase Perturbations | kinase perturbations changing expression of LINC00663 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of LINC00663 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations | transcription factor perturbations changing expression of LINC00663 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Viral Infections | virus perturbations changing expression of LINC00663 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of LINC00663 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of LINC00663 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00663 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles | cell lines with high or low expression of LINC00663 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset. | |
| Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles | cell types and tissues with high or low DNA methylation of LINC00663 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset. | |