| Name | long intergenic non-protein coding RNA 665 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC00665 is a multifunctional long non‐coding RNA whose aberrant expression has been reported in a broad range of human malignancies as well as in non‐malignant pathologic contexts. In several tumor types—including lung adenocarcinoma, breast cancer, hepatocellular carcinoma, gastric cancer, colorectal cancer, glioma, prostate cancer, and others—LINC00665 is frequently upregulated and correlates with adverse clinical features and poor prognosis."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "4"}]}, {"type": "t", "text": " LINC00665 promotes tumor cell proliferation, migration, invasion, angiogenesis, and epithelial-to-mesenchymal transition by modulating key oncogenic signaling cascades (including ERK, NF-κB, PI3K/Akt, and Wnt/β-catenin) and by interacting directly with proteins that regulate stability and transcriptional activity. Mechanistically, it frequently acts as a competing endogenous RNA (ceRNA) that “sponges” tumor-suppressive microRNAs (for example, miR-98, miR-379-5p, miR-138-5p, miR-3619-5p, among others), thereby de-repressing the expression of a variety of oncogenes such as AKR1B10, LIN28B, E2F3, β-catenin, and additional effectors."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": " In some contexts, such as non-small cell lung cancer and gastric cancer, LINC00665 also contributes to chemoresistance by modulating drug-response genes and stress pathways."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": " Intriguingly, recent work in breast cancer has shown that LINC00665 can encode a functional micropeptide (CIP2A-BP) whose expression is tightly controlled by TGF-β signaling and which modulates tumor metastasis by affecting PI3K/AKT/NFκB signaling."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": " Beyond its well‐established oncogenic functions, LINC00665 is also implicated in shaping the tumor microenvironment and immune response—as evidenced by its incorporation into ceRNA networks that influence lymphocyte infiltration in conditions such as systemic sclerosis-related interstitial lung disease"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": "—and in modulating neurotoxicity induced by agents like bupivacaine."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "10"}]}, {"type": "t", "text": " Overall, this diverse spectrum of molecular functions underscores LINC00665’s potential as both a prognostic biomarker and a promising therapeutic target across multiple human cancers and pathological conditions."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "11"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Zhuangzhuang Cong, Yifei Diao, Yang Xu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA linc00665 promotes lung adenocarcinoma progression and functions as ceRNA to regulate AKR1B10-ERK signaling by sponging miR-98."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Death Dis (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41419-019-1361-3"}], "href": "https://doi.org/10.1038/s41419-019-1361-3"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30692511"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30692511"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Wei Ji, Yu-Ling Diao, Yi-Ran Qiu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00665 promotes breast cancer progression through regulation of the miR-379-5p/LIN28B axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Death Dis (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41419-019-2213-x"}], "href": "https://doi.org/10.1038/s41419-019-2213-x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31907362"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31907362"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Jie Ding, Jingjing Zhao, Lin Huan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Inflammation-Induced Long Intergenic Noncoding RNA (LINC00665) Increases Malignancy Through Activating the Double-Stranded RNA-Activated Protein Kinase/Nuclear Factor Kappa B Pathway in Hepatocellular Carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hepatology (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/hep.31195"}], "href": "https://doi.org/10.1002/hep.31195"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32083756"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32083756"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Zhuangzhuang Cong, Yifei Diao, Xiaokun Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA linc00665 interacts with YB-1 and promotes angiogenesis in lung adenocarcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2020.04.108"}], "href": "https://doi.org/10.1016/j.bbrc.2020.04.108"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32423800"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32423800"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Minhao Lv, Qixin Mao, Juntao Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Knockdown of LINC00665 inhibits proliferation and invasion of breast cancer via competitive binding of miR-3619-5p and inhibition of catenin beta 1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Mol Biol Lett (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s11658-020-00235-8"}], "href": "https://doi.org/10.1186/s11658-020-00235-8"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32983239"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32983239"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Min Lu, Xinglei Qin, Yajun Zhou, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA LINC00665 promotes gemcitabine resistance of Cholangiocarcinoma cells via regulating EMT and stemness properties through miR-424-5p/BCL9L axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Death Dis (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41419-020-03346-4"}], "href": "https://doi.org/10.1038/s41419-020-03346-4"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33436545"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33436545"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Chao Yue, Chen Yu, Rui Peng, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00665/miR-379-5p/GRP78 regulates cisplatin sensitivity in gastric cancer by modulating endoplasmic reticulum stress."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cytotechnology (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s10616-021-00466-3"}], "href": "https://doi.org/10.1007/s10616-021-00466-3"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34149174"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34149174"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Binbin Guo, Siqi Wu, Xun Zhu, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "LINC00665 rescues bupivacaine induced neurotoxicity in human neural cell of SH-SY5Y through has-miR-34a-5p."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Brain Res Bull (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.brainresbull.2021.10.004"}], "href": "https://doi.org/10.1016/j.brainresbull.2021.10.004"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34626694"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34626694"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Jing Zhu, Yirao Zhang, Xuyu Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The Emerging Roles of LINC00665 in Human Cancers."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Cell Dev Biol (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3389/fcell.2022.839177"}], "href": "https://doi.org/10.3389/fcell.2022.839177"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35356290"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35356290"}]}]}]}
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| NCBI Gene ID | 100506930 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC00665 has 739 functional associations with biological entities spanning 4 categories (organism, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 10 datasets.
Click the + buttons to view associations for LINC00665 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq | tissue samples with high or low expression of LINC00665 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00665 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00665 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of LINC00665 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of LINC00665 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GEO Signatures of Differentially Expressed Genes for Viral Infections | virus perturbations changing expression of LINC00665 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of LINC00665 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of LINC00665 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00665 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles | cell types and tissues with high or low DNA methylation of LINC00665 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset. | |