LINC00671 Gene

Name long intergenic non-protein coding RNA 671
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC00671 is a long non‐coding RNA that exhibits tumor‐suppressive functions in several cancer types. In thyroid cancer, LINC00671 is negatively correlated with lactate dehydrogenase A (LDHA) expression, and its downregulation—exacerbated by hypoxia via STAT3 activation—results in enhanced glycolysis, tumor growth, and lung metastasis. Restoration of LINC00671 expression is associated with better clinical outcomes, suggesting that it plays an important role in dampening cancer progression by inhibiting LDHA and its downstream effects."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n In pancreatic cancer, multiple independent studies have demonstrated that LINC00671 is expressed at low levels in tumor samples compared to normal tissue. Mechanistic studies indicate that overexpression of LINC00671 leads to inhibition of key oncogenic pathways, including the AKT, ERK, and epithelial‐mesenchymal transition (EMT) cascades, and is associated with reduced cell proliferation, invasion, and migration. This tumor‐suppressive function further correlates with improved patient prognosis"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "and is additionally supported by serum and tissue analyses where lower LINC00671 expression is indicative of advanced disease stages."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n In renal cell carcinoma, reduced levels of LINC00671 have been linked to enhanced tumor proliferation, migration, and invasion. Functional experiments reinforce that LINC00671 overexpression suppresses these malignant phenotypes by regulating the miR‐221-5p/SOCS1 axis, with lower expression being associated with unfavorable clinicopathological features and shorter patient survival."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Collectively, these findings underscore the critical role of LINC00671 as a tumor suppressor acting through diverse mechanisms—including metabolic regulation in thyroid cancer and modulation of signal transduction and EMT in pancreatic and renal cancers—highlighting its potential as a therapeutic target and prognostic biomarker.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Nan Huo, Rui Cong, Zhi-Jia Sun, et al. "}, {"type": "b", "children": [{"type": "t", "text": "STAT3/LINC00671 axis regulates papillary thyroid tumor growth and metastasis via LDHA-mediated glycolysis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Death Dis (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41419-021-04081-0"}], "href": "https://doi.org/10.1038/s41419-021-04081-0"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34404767"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34404767"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Shibin Qu, Kunwei Niu, Jianlin Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00671 suppresses cell proliferation and metastasis in pancreatic cancer by inhibiting AKT and ERK signaling pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Gene Ther (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41417-020-00213-4"}], "href": "https://doi.org/10.1038/s41417-020-00213-4"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32801328"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32801328"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Baogang Zhang, Changfeng Li, Zhixia Sun "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA LINC00346, LINC00578, LINC00673, LINC00671, LINC00261, and SNHG9 are novel prognostic markers for pancreatic cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Transl Res (2018)"}]}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30210701"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30210701"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Gang Jin, Haiyan Mi, Yunfei Ye, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00671 inhibits renal cell cancer progression via regulating miR-221-5p/SOCS1 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Transl Res (2021)"}]}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34377233"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34377233"}]}]}]}
NCBI Gene ID 388387
API
Download Associations
Predicted Functions View LINC00671's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC00671's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC00671's ARCHS4 Predicted Functions.

Functional Associations

LINC00671 has 954 functional associations with biological entities spanning 4 categories (disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 14 datasets.

Click the + buttons to view associations for LINC00671 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles tissues with high or low expression of LINC00671 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset.
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray tissue samples with high or low expression of LINC00671 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray dataset.
Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles tissues with high or low expression of LINC00671 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00671 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00671 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
GEO Signatures of Differentially Expressed Genes for Diseases disease perturbations changing expression of LINC00671 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of LINC00671 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of LINC00671 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations transcription factor perturbations changing expression of LINC00671 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of LINC00671 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of LINC00671 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
HuBMAP Azimuth Cell Type Annotations cell types associated with LINC00671 gene from the HuBMAP Azimuth Cell Type Annotations dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00671 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of LINC00671 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.