LINC00678 Gene

Name long intergenic non-protein coding RNA 678
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Long intergenic non‐coding RNA 00678 (LINC00678) is emerging as a potential regulator of gene expression in neural contexts. Although neither abstract explicitly details the functions of LINC00678, observations from neurons derived from different induced pluripotent stem cell (iPSC) sources suggest that regulatory non‐coding RNAs may contribute to regional and developmental differences in gene expression—for instance, in the modulation of HOX gene family members and key transcription factors involved in forebrain development (see."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In addition, reviews of long non‐coding RNAs highlight that molecules like LINC00678 can influence gene expression through diverse mechanisms including interactions with histone-modifying complexes, transcription factors, and RNA molecules, thereby affecting both transcriptional and post‐transcriptional regulation (see."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " Together, these findings support the notion that LINC00678 may play a multifaceted role in neural development and neuropsychiatric disease modeling by modulating complex regulatory networks essential for neuronal differentiation and cellular homeostasis.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Jian Chen, Mingyan Lin, John J Foxe, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Transcriptome comparison of human neurons generated using induced pluripotent stem cells derived from dental pulp and skin fibroblasts."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0075682"}], "href": "https://doi.org/10.1371/journal.pone.0075682"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24098394"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24098394"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Amanda Salviano-Silva, Sara Cristina Lobo-Alves, Rodrigo Coutinho de Almeida, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Besides Pathology: Long Non-Coding RNA in Cell and Tissue Homeostasis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Noncoding RNA (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3390/ncrna4010003"}], "href": "https://doi.org/10.3390/ncrna4010003"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29657300"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29657300"}]}]}]}
NCBI Gene ID 101410541
API
Download Associations
Predicted Functions View LINC00678's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC00678's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC00678's ARCHS4 Predicted Functions.

Functional Associations

LINC00678 has 16 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 3 datasets.

Click the + buttons to view associations for LINC00678 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00678 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of LINC00678 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of LINC00678 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.