LINC00837 Gene

Name long intergenic non-protein coding RNA 837
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC00837 is a long intergenic non‐coding RNA that has been implicated in diverse biological contexts. In osteosarcoma, LINC00837 was identified as one of six lncRNAs whose combined expression signature showed a strong association with patient prognosis, tumor purity, and metastatic potential, suggesting that it may serve as a predictive biomarker and contribute to tumor progression and microenvironment modulation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In a separate study focusing on the immediate cellular responses to altered gravitational forces, LINC00837 was among a few gravity‐regulated genes in human T lymphocytic cells that responded rapidly (within seconds to minutes) to changes in gravitational environments, implying a role in the quick adaptation of cellular function under physical stress."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " Although investigations in human testes and brain have primarily focused on the roles of other regulatory RNAs such as piRNAs in mediating genomic stability and disease processes"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": ", the identification of LINC00837 in both osteosarcoma and gravity-stress experiments highlights its emerging importance as a regulatory non-coding RNA, potentially intersecting with broader RNA-mediated networks that govern gene expression in response to pathological and environmental cues.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Yi He, Haiting Zhou, Haoran Xu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Construction of an Immune-Related lncRNA Signature That Predicts Prognosis and Immune Microenvironment in Osteosarcoma Patients."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Oncol (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3389/fonc.2022.769202"}], "href": "https://doi.org/10.3389/fonc.2022.769202"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35494024"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35494024"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Cora S Thiel, Swantje Hauschild, Andreas Huge, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Dynamic gene expression response to altered gravity in human T cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41598-017-05580-x"}], "href": "https://doi.org/10.1038/s41598-017-05580-x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28701719"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28701719"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Hongseok Ha, Jimin Song, Shuoguo Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A comprehensive analysis of piRNAs from adult human testis and their relationship with genes and mobile elements."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "BMC Genomics (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/1471-2164-15-545"}], "href": "https://doi.org/10.1186/1471-2164-15-545"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24981367"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24981367"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Wenying Qiu, Xiaoyun Guo, Xiandong Lin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Transcriptome-wide piRNA profiling in human brains of Alzheimer's disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neurobiol Aging (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.neurobiolaging.2017.05.020"}], "href": "https://doi.org/10.1016/j.neurobiolaging.2017.05.020"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28654860"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28654860"}]}]}]}
NCBI Gene ID 100507605
API
Download Associations
Predicted Functions View LINC00837's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC00837's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC00837's ARCHS4 Predicted Functions.

Functional Associations

LINC00837 has 169 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 5 datasets.

Click the + buttons to view associations for LINC00837 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00837 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00837 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of LINC00837 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00837 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of LINC00837 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.