LINC00844 Gene

Name long intergenic non-protein coding RNA 844
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC00844 is emerging as a key long noncoding RNA involved in the regulation of cellular processes in several disease contexts. In prostate cancer, LINC00844 is downregulated, and its overexpression suppresses tumor progression by recruiting the transcription factor EBF1 to upregulate GSTP1, which in turn reduces cell proliferation and enhances apoptosis (a tumor‐suppressive effect)."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In hepatocellular carcinoma, independent studies have similarly demonstrated that low LINC00844 expression correlates with aggressive tumor characteristics, whereas its restoration inhibits cell proliferation, migration, and invasion, partly through the downregulation of oncogenic targets such as NDRG1."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " Moreover, in the context of liver toxicity, LINC00844 is highly enriched in the liver and plays a regulatory role in drug metabolism by modulating key drug‐metabolizing enzymes and nuclear receptors; it acts, at least in part, as a sponge for hsa‐miR-486-5p to protect targets like SULT2A1, thereby influencing acetaminophen-induced toxicity."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": " Beyond its function in liver and liver-derived cancers, LINC00844 has been integrated into several prognostic and ceRNA signatures in glioma (including ferroptosis-related and enhancer RNA profiles) and in recurrent implantation failure, indicating its potential as a biomarker."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "5", "end_ref": "7"}]}, {"type": "t", "text": " Additionally, in atrial fibrillation, LINC00844 expression is inversely correlated with the abundance of resting dendritic cells, suggesting a possible role in modulating immune cell infiltration and the atrial inflammatory milieu."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Kaiyan Qiu, Zhixiong Zheng, Yingfu Huang "}, {"type": "b", "children": [{"type": "t", "text": "Long intergenic noncoding RNA 00844 promotes apoptosis and represses proliferation of prostate cancer cells through upregulating GSTP1 by recruiting EBF1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Physiol (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jcp.29690"}], "href": "https://doi.org/10.1002/jcp.29690"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32329523"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32329523"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Wei Zhou, Kang Huang, Qiuyan Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00844 promotes proliferation and migration of hepatocellular carcinoma by regulating NDRG1 expression."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PeerJ (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.7717/peerj.8394"}], "href": "https://doi.org/10.7717/peerj.8394"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32025371"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32025371"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Bingyi Lin, Hui He, Qijun Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA00844 inhibits MAPK signaling to suppress the progression of hepatocellular carcinoma by targeting AZGP1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Ann Transl Med (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.21037/atm-20-3848"}], "href": "https://doi.org/10.21037/atm-20-3848"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33313110"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33313110"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Dongying Li, Leihong Wu, Bridgett Knox, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long noncoding RNA LINC00844-mediated molecular network regulates expression of drug metabolizing enzymes and nuclear receptors in human liver cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Arch Toxicol (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s00204-020-02706-5"}], "href": "https://doi.org/10.1007/s00204-020-02706-5"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32222775"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32222775"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Jianglin Zheng, Zijie Zhou, Yue Qiu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A Prognostic Ferroptosis-Related lncRNAs Signature Associated With Immune Landscape and Radiotherapy Response in Glioma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Cell Dev Biol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3389/fcell.2021.675555"}], "href": "https://doi.org/10.3389/fcell.2021.675555"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34095147"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34095147"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Nuan Lin, Jia-Zhe Lin "}, {"type": "b", "children": [{"type": "t", "text": "Identification of long non-coding RNA biomarkers and signature scoring, with competing endogenous RNA networks- targeted drug candidates for recurrent implantation failure."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Fertil (Camb) (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1080/14647273.2021.1956693"}], "href": "https://doi.org/10.1080/14647273.2021.1956693"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34308739"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34308739"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Han Lin, Yong Yang, Chongxian Hou, et al. "}, {"type": "b", "children": [{"type": "t", "text": "An integrated analysis of enhancer RNAs in glioma and a validation of their prognostic values."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Transl Res (2021)"}]}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34539983"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34539983"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Liangzhen Xie, GuanShen Huang, Mingjian Gao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of Atrial Fibrillation-Related lncRNA Based on Bioinformatic Analysis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Dis Markers (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1155/2022/8307975"}], "href": "https://doi.org/10.1155/2022/8307975"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35154514"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35154514"}]}]}]}
NCBI Gene ID 100507008
API
Download Associations
Predicted Functions View LINC00844's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC00844's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC00844's ARCHS4 Predicted Functions.

Functional Associations

LINC00844 has 687 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 5 datasets.

Click the + buttons to view associations for LINC00844 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of LINC00844 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Kinase Perturbations kinase perturbations changing expression of LINC00844 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of LINC00844 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of LINC00844 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00844 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.