| Name | long intergenic non-protein coding RNA 847 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC00847 has emerged as a multifunctional long non‐coding RNA that is dysregulated in several human diseases. In laryngeal squamous cell carcinoma, for instance, LINC00847 is overexpressed in tumor tissues and predominantly localized in the cytoplasm, where it enhances cell proliferation, migration, invasion, and cell cycle progression. Mechanistically, it acts as a competing endogenous RNA to sequester microRNA‐181a‐5p, leading to increased expression of pro‐tumorigenic mediators such as ZEB2."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In the context of inflammatory diseases, increased levels of LINC00847 in peripheral blood mononuclear cells have been associated with asthma exacerbation in children, suggesting that it may serve as a potential biomarker for discriminating between exacerbation and remission states."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " Moreover, bioinformatics analysis in renal cell carcinoma models has indicated that modulation of LINC00847—as observed in studies involving bacterial toxin (the Staphylococcus aureus tst gene)—may be linked to the regulation of apoptotic pathways."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " Its identification within competing endogenous RNA networks in primary Sjögren’s syndrome also points to a possible contributory role in immune cell dysregulation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": " Furthermore, exposure to the hepatotoxin microcystin‐LR provokes upregulation of LINC00847 alongside other lncRNAs, with pathway enrichment analyses implicating it in signaling cascades such as PI3K–AKT and MAPK that may underlie liver damage."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Collectively, these findings highlight the multifaceted roles of LINC00847 in promoting malignant behaviors in cancer, modulating inflammatory responses, and contributing to toxin‐induced tissue injury. Further research into its molecular mechanisms may provide insights into its potential as both a biomarker and a therapeutic target across diverse disease settings.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Wei Li, Xionghui Hu, Xiaolin Huang "}, {"type": "b", "children": [{"type": "t", "text": "Long intergenic non-protein coding RNA 847 promotes laryngeal squamous cell carcinoma progression through the microRNA-181a-5p/zinc finger E-box binding homeobox 2 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Bioengineered (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1080/21655979.2022.2062531"}], "href": "https://doi.org/10.1080/21655979.2022.2062531"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35435130"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35435130"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Jiaying Hu, Zhike Wang, Suzhen Han, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Expression of LINC00847 in Peripheral Blood Mononuclear Cells of Children with Asthma and Its Prediction between Asthma Exacerbation and Remission."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Genet Res (Camb) (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1155/2022/5678257"}], "href": "https://doi.org/10.1155/2022/5678257"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35356750"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35356750"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Maryam Safarpour-Dehkordi, Abbas Doosti, Mohammad-Saied Jami "}, {"type": "b", "children": [{"type": "t", "text": "Integrative Analysis of lncRNAs in Kidney Cancer to Discover A New lncRNA ("}, {"type": "a", "children": [{"type": "t", "text": "i"}], "href": "i"}, {"type": "t", "text": "LINC00847"}, {"type": "a", "children": [{"type": "t", "text": "/i"}], "href": "/i"}, {"type": "t", "text": ") as A Therapeutic Target for Staphylococcal Enterotoxin "}, {"type": "a", "children": [{"type": "t", "text": "i"}], "href": "i"}, {"type": "t", "text": "tst"}, {"type": "a", "children": [{"type": "t", "text": "/i"}], "href": "/i"}, {"type": "t", "text": " Gene."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell J (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.22074/cellj.2020.6996"}], "href": "https://doi.org/10.22074/cellj.2020.6996"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32779439"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32779439"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Xiaochan Chen, Qi Cheng, Yan Du, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Differential long non-coding RNA expression profile and function analysis in primary Sjogren's syndrome."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "BMC Immunol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12865-021-00439-3"}], "href": "https://doi.org/10.1186/s12865-021-00439-3"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34284720"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34284720"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Cong Wen, Shu Yang, Shuilin Zheng, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Analysis of long non-coding RNA profiled following MC-LR-induced hepatotoxicity using high-throughput sequencing."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Toxicol Environ Health A (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1080/15287394.2018.1532717"}], "href": "https://doi.org/10.1080/15287394.2018.1532717"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30430930"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30430930"}]}]}]}
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| NCBI Gene ID | 729678 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC00847 has 971 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 14 datasets.
Click the + buttons to view associations for LINC00847 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of LINC00847 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset. | |
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq | tissue samples with high or low expression of LINC00847 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset. | |
| Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of LINC00847 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00847 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00847 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of LINC00847 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Kinase Perturbations | kinase perturbations changing expression of LINC00847 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations | transcription factor perturbations changing expression of LINC00847 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of LINC00847 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of LINC00847 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| GTEx Tissue-Specific Aging Signatures | tissue samples with high or low expression of LINC00847 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00847 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles | cell lines with high or low expression of LINC00847 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset. | |
| Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles | cell types and tissues with high or low DNA methylation of LINC00847 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset. | |