LINC00858 Gene

Name long intergenic non-protein coding RNA 858
Summary
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For example, by sponging miR‑22‑3p"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}, {"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": ", miR‑422a"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": ", miR‑4766‑5p"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": ", miR‑3182"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": ", miR‑134‑5p"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "14"}]}, {"type": "t", "text": ", miR‑363‑3p"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "12"}]}, {"type": "t", "text": ", miR‑25‑3p"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": ", miR‑653‑5p"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "17"}]}, {"type": "t", "text": ", miR‑153‑3p"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "16"}]}, {"type": "t", "text": ", and miR‑139."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "19"}]}, {"type": "t", "text": "LINC00858 derepresses a variety of oncogenes—including YWHAZ, kallikrein‐related peptidase 4 (KLK4), serine/threonine kinase PAK2, WNK2, hepatocyte nuclear factor 4α (HNF4α), matrix metalloproteinase 2 (MMP2), SMAD family member 7 (SMAD7), RAD18, Rabl3, FOXP4, and CDK14—and modulates key signaling cascades such as the MAPK and STAT3/5 pathways."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "10"}, {"type": "fg_f", "ref": "21"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Collectively, the aberrant overexpression of LINC00858 and its multifaceted regulatory impacts on ceRNA networks and oncogenic signaling pathways underscore its pivotal role in tumor progression. These insights not only provide a better understanding of cancer pathogenesis but also highlight the potential of LINC00858 as a prognostic biomarker and therapeutic target across diverse cancer types."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "22"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Qian-Kun Sha, Lin Chen, Jia-Zhuang Xi, et al. 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Synonyms CRCAL-2
NCBI Gene ID 170425
API
Download Associations
Predicted Functions View LINC00858's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC00858's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC00858's ARCHS4 Predicted Functions.

Functional Associations

LINC00858 has 157 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 5 datasets.

Click the + buttons to view associations for LINC00858 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00858 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00858 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of LINC00858 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of LINC00858 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00858 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.