| Name | long intergenic non-protein coding RNA 870 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Recent studies have highlighted the multifaceted role of the long nonācoding RNA LINC00870 in diverse disease contexts. In maternal blood during the third trimester, decreased LINC00870 levels were found to be inversely correlated with EBF1 mRNA expression, with higher levels of LINC00870 being associated with an increased risk of spontaneous preterm birth (sPTB)."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In a separate investigation related to tuberculosis (TB), LINC00870 expression was significantly increased in peripheral blood mononuclear cells infected with Mycobacterium tuberculosis. Overexpression of LINC00870 in these cells shifted the immune cytokine balance by inhibiting Th1-secreted cytokines while promoting Th2-secreted cytokines, concomitant with activation of the JAK/STAT signaling pathway as evidenced by increased p-STAT5 and p-JAK2 protein levels. Furthermore, elevated levels of LINC00870 were observed in both sputum and plasma samples from patients with active TB and latent TB infection, with levels decreasing after three months of therapy, indicating its potential as a biomarker for TB diagnosis and treatment monitoring."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Guoli Zhou, Claudia Holzman, Bin Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "EBF1-Correlated Long Non-coding RNA Transcript Levels in 3rd Trimester Maternal Blood and Risk of Spontaneous Preterm Birth."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Reprod Sci (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s43032-020-00320-5"}], "href": "https://doi.org/10.1007/s43032-020-00320-5"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32959224"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32959224"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Wang Jianfang, Wang Hui, Kang Le "}, {"type": "b", "children": [{"type": "t", "text": "LINC00870 regulates Th1/Th2 via the JAK/STAT pathway in peripheral blood mononuclear cells infected with Mycobacterium tuberculosis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int Immunopharmacol (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.intimp.2020.107188"}], "href": "https://doi.org/10.1016/j.intimp.2020.107188"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34407915"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34407915"}]}]}]}
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| NCBI Gene ID | 201617 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC00870 has 328 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 7 datasets.
Click the + buttons to view associations for LINC00870 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00870 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00870 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of LINC00870 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of LINC00870 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00870 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of LINC00870 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles | cell types and tissues with high or low DNA methylation of LINC00870 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset. | |