LINC00877 Gene

Name long intergenic non-protein coding RNA 877
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC00877 is a long non‐coding RNA that has recently emerged as a candidate regulator in cancer, with evidence suggesting roles in both hematologic and neuroendocrine malignancies. While broad analyses have profiled numerous lncRNAs in diverse biological processes—ranging from human B‐cell development (1) and Th17 cell differentiation (2) to general mechanisms of gene regulation (3)—studies focused on malignant contexts have highlighted LINC00877 as particularly noteworthy. In acute myeloid leukemia, LINC00877 is among several lncRNAs whose expression differs across cytogenetic risk groups, implicating it as a potential biomarker for disease stratification and as a target for modulating leukemic cell behavior (4). Moreover, in pheochromocytomas and paragangliomas, reduced expression of LINC00877 has been validated in metastatic cases compared to non‐metastatic ones, suggesting that it may function as a tumor suppressor whose downregulation is associated with aggressive clinical outcomes (5). Together, these findings support further investigation into the molecular functions and mechanistic roles of LINC00877 as a prognostic indicator and therapeutic target in cancer."}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "5"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Andreas Petri, Karen Dybkær, Martin Bøgsted, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long Noncoding RNA Expression during Human B-Cell Development."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0138236"}], "href": "https://doi.org/10.1371/journal.pone.0138236"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26394393"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26394393"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Soile Tuomela, Sini Rautio, Helena Ahlfors, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Comparative analysis of human and mouse transcriptomes of Th17 cell priming."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncotarget (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.18632/oncotarget.7963"}], "href": "https://doi.org/10.18632/oncotarget.7963"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26967054"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26967054"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Amanda Salviano-Silva, Sara Cristina Lobo-Alves, Rodrigo Coutinho de Almeida, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Besides Pathology: Long Non-Coding RNA in Cell and Tissue Homeostasis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Noncoding RNA (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3390/ncrna4010003"}], "href": "https://doi.org/10.3390/ncrna4010003"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29657300"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29657300"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Alina-Andreea Zimta, Ciprian Tomuleasa, Iman Sahnoune, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long Non-coding RNAs in Myeloid Malignancies."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Oncol (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3389/fonc.2019.01048"}], "href": "https://doi.org/10.3389/fonc.2019.01048"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31681586"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31681586"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Suman Ghosal, Boqun Zhu, Thanh-Truc Huynh, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A long noncoding RNA-microRNA expression signature predicts metastatic signature in pheochromocytomas and paragangliomas."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Endocrine (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s12020-021-02857-0"}], "href": "https://doi.org/10.1007/s12020-021-02857-0"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34536193"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34536193"}]}]}]}
NCBI Gene ID 285286
API
Download Associations
Predicted Functions View LINC00877's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC00877's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC00877's ARCHS4 Predicted Functions.

Functional Associations

LINC00877 has 580 functional associations with biological entities spanning 3 categories (disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA) extracted from 7 datasets.

Click the + buttons to view associations for LINC00877 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of LINC00877 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations transcription factor perturbations changing expression of LINC00877 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of LINC00877 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of LINC00877 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
GTEx Tissue-Specific Aging Signatures tissue samples with high or low expression of LINC00877 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset.
GWAS Catalog SNP-Phenotype Associations phenotypes associated with LINC00877 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00877 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.