LINC00887 Gene

Name long intergenic non-protein coding RNA 887
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC00887 has emerged as a multifaceted long non‐coding RNA with context‐dependent roles in cancer progression. In glioma, LINC00887 is upregulated and functions in a pro‐tumorigenic manner by positively regulating CCND1 expression, thereby promoting cell proliferation and correlating with a poorer overall survival outcome."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In nasopharyngeal carcinoma, increased levels of LINC00887 enhance cell proliferation through a regulatory loop in which LINC00887 acts as a molecular sponge for miRNA‑203b‑3p and upregulates NUP205."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " In adrenocortical carcinoma, LINC00887 has been identified among lncRNAs associated with prognosis, suggesting its potential value as a biomarker even though its mechanistic role requires further clarification."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Moreover, in tongue squamous carcinoma, alternative transcript variants of LINC00887 (887S and 887L) have been characterized. Under normoxic conditions the variants interact, but upon hypoxia they dissociate and function antagonistically on a common target, CA9, with one variant recruiting HIF1α to activate CA9 transcription and the other engaging DNMT1 to mediate CA9 promoter methylation, thereby fine‐tuning the tumor’s adaptive response to hypoxic stress."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n In cervical cancer, LINC00887 acts as a tumor suppressor. Its overexpression inhibits cell proliferation and invasion by sponging miR‑454‑3p, which in turn leads to an upregulation of FRMD6 and activation of the Hippo signaling pathway."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": " In contrast, studies in lung carcinomas and non‐small cell lung cancer have shown that LINC00887 functions as an oncogenic factor; here it interacts with miR‑206 (and other microRNAs) to regulate targets such as NRP1, fibronectin 1, MET, and SMAD4, thereby facilitating cell migration, epithelial–mesenchymal transition, and the acquisition of stem cell–like properties."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Finally, in renal cell carcinoma, elevated levels of LINC00887 in both tumor tissue and patient serum correlate with enhanced cell proliferation and suggest its potential utility as a non‐invasive biomarker for early-stage disease."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": " Overall, depending on the tumor type, LINC00887 can either promote or inhibit malignant phenotypes through its roles as a competing endogenous RNA and by modulating specific downstream targets, highlighting its potential value as both a prognostic biomarker and a candidate for therapeutic intervention.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "X-M Shen, S Han, N Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00887 aggravates the malignant progression of glioma via upregulating CCND1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Eur Rev Med Pharmacol Sci (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.26355/eurrev_202102_25091"}], "href": "https://doi.org/10.26355/eurrev_202102_25091"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33660802"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33660802"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "W-J Yue, Y Wang, W-Y Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00887 regulates the proliferation of nasopharyngeal carcinoma via targeting miRNA-203b-3p to upregulate NUP205."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Eur Rev Med Pharmacol Sci (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.26355/eurrev_202009_22826"}], "href": "https://doi.org/10.26355/eurrev_202009_22826"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32964975"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32964975"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Yang Zhou, Xiao Wang, Xi Zhu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Bioinformatic analysis of long non-coding RNA-associated competing endogenous RNA network in adrenocortical carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Transl Cancer Res (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.21037/tcr.2019.09.34"}], "href": "https://doi.org/10.21037/tcr.2019.09.34"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35116967"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35116967"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Tao Shen, Wangxiao Xia, Sainan Min, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A pair of long intergenic non-coding RNA LINC00887 variants act antagonistically to control Carbonic Anhydrase IX transcription upon hypoxia in tongue squamous carcinoma progression."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "BMC Biol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12915-021-01112-2"}], "href": "https://doi.org/10.1186/s12915-021-01112-2"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34493285"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34493285"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Pei Li, Jinsheng Wang, Lingran Zhi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Linc00887 suppresses tumorigenesis of cervical cancer through regulating the miR-454-3p/FRMD6-Hippo axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Cell Int (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12935-020-01730-w"}], "href": "https://doi.org/10.1186/s12935-020-01730-w"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33413358"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33413358"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Ling-Bin Xu, Bian-Xin Bo, Jie Xiong, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA LINC00887 promotes progression of lung carcinoma by targeting the microRNA-206/NRP1 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncol Lett (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/ol.2020.12348"}], "href": "https://doi.org/10.3892/ol.2020.12348"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33376520"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33376520"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Yingxuan Tian, Min Yu, Li Sun, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non‑coding RNA00887 reduces the invasion and metastasis of non‑small cell lung cancer by causing the degradation of miRNAs."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncol Rep (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/or.2019.7228"}], "href": "https://doi.org/10.3892/or.2019.7228"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31322230"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31322230"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Junjie Xie, Yu Zhong, Rong Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Serum long non-coding RNA LINC00887 as a potential biomarker for diagnosis of renal cell carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "FEBS Open Bio (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/2211-5463.12930"}], "href": "https://doi.org/10.1002/2211-5463.12930"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32654370"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32654370"}]}]}]}
Synonyms HEIRCC
NCBI Gene ID 100131551
API
Download Associations
Predicted Functions View LINC00887's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC00887's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC00887's ARCHS4 Predicted Functions.

Functional Associations

LINC00887 has 391 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 8 datasets.

Click the + buttons to view associations for LINC00887 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00887 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00887 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of LINC00887 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Kinase Perturbations kinase perturbations changing expression of LINC00887 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of LINC00887 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of LINC00887 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00887 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of LINC00887 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.