| Name | long intergenic non-protein coding RNA 893 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC00893 has been identified as a tumor‐suppressing long noncoding RNA in multiple cancers. In gastric cancer, LINC00893 is found at low levels in tumor tissues but can be induced by p53 activation (via Nutlin‑3 treatment) in cancer cells. Functionally, its overexpression suppresses cell proliferation, migration, and invasion by binding to the RNA binding protein RBFOX2 and promoting its ubiquitin‑mediated degradation, thereby inhibiting epithelial–mesenchymal transition (EMT) and related oncogenic processes."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n In papillary thyroid carcinoma, LINC00893 is also downregulated relative to normal tissue. Its enforced expression impedes tumor cell proliferation and migration by stabilizing PTEN mRNA through the recruitment of the FUS protein. This stabilization leads to increased PTEN levels and subsequent inhibition of the AKT signaling pathway, thereby further curtailing tumor progression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n In summary, the current findings support a model in which LINC00893—induced indirectly by p53 in certain contexts—acts as a tumor suppressor by modulating key pathways involved in EMT and AKT signaling. These insights suggest that restoring or mimicking LINC00893 function may offer a potential therapeutic avenue in cancers such as gastric cancer and papillary thyroid carcinoma.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Xinde Ou, Xingyu Zhou, Jin Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "p53-Induced LINC00893 Regulates RBFOX2 Stability to Suppress Gastric Cancer Progression."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Cell Dev Biol (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3389/fcell.2021.796451"}], "href": "https://doi.org/10.3389/fcell.2021.796451"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35127712"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35127712"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Shujing Li, Yanyan Zhang, Jian Dong, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00893 inhibits papillary thyroid cancer by suppressing AKT pathway via stabilizing PTEN."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Biomark (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3233/CBM-190543"}], "href": "https://doi.org/10.3233/CBM-190543"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32924982"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32924982"}]}]}]}
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| NCBI Gene ID | 100131434 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC00893 has 871 functional associations with biological entities spanning 3 categories (chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 12 datasets.
Click the + buttons to view associations for LINC00893 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of LINC00893 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset. | |
| Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of LINC00893 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00893 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00893 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of LINC00893 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of LINC00893 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of LINC00893 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of LINC00893 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00893 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles | cell lines with high or low expression of LINC00893 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of LINC00893 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles | cell types and tissues with high or low DNA methylation of LINC00893 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset. | |