| Name | long intergenic non-protein coding RNA 905 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Long non‐coding RNAs (lncRNAs) are increasingly recognized as key regulators in both normal biology and disease. In a recent study of cervical cancer recurrence, LINC00905 was identified as one of several lncRNAs whose high expression was significantly associated with poorer recurrence‐free survival. In this work, based on TCGA data analysis and Cox regression modeling, elevated LINC00905 levels contributed to a recurrence risk score (RRS) that effectively stratified patients with a higher risk of tumor relapse. These findings suggest that LINC00905 may serve as a prognostic biomarker and might play a functional role in promoting an aggressive cervical cancer phenotype. Although other studies have emphasized the diverse functions of non‐coding sequences—ranging from the contribution of retroposed elements to gene evolution in primates"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "to the emerging involvement of piRNAs in neurodegenerative disorders such as Alzheimer’s disease"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "—the cervical cancer study highlights a specific clinical context in which LINC00905 is directly linked to adverse outcomes."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Robert Baertsch, Mark Diekhans, W James Kent, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Retrocopy contributions to the evolution of the human genome."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "BMC Genomics (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/1471-2164-9-466"}], "href": "https://doi.org/10.1186/1471-2164-9-466"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18842134"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18842134"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Wenying Qiu, Xiaoyun Guo, Xiandong Lin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Transcriptome-wide piRNA profiling in human brains of Alzheimer's disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neurobiol Aging (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.neurobiolaging.2017.05.020"}], "href": "https://doi.org/10.1016/j.neurobiolaging.2017.05.020"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28654860"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28654860"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Yan Zhang, Xing Zhang, Haixia Zhu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of Potential Prognostic Long Non-Coding RNA Biomarkers for Predicting Recurrence in Patients with Cervical Cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Manag Res (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.2147/CMAR.S231796"}], "href": "https://doi.org/10.2147/CMAR.S231796"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32099468"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32099468"}]}]}]}
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| NCBI Gene ID | 148231 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC00905 has 247 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 8 datasets.
Click the + buttons to view associations for LINC00905 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray | tissue samples with high or low expression of LINC00905 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00905 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00905 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of LINC00905 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Kinase Perturbations | kinase perturbations changing expression of LINC00905 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of LINC00905 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00905 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles | cell types and tissues with high or low DNA methylation of LINC00905 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset. | |