| Name | long intergenic non-protein coding RNA 908 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC00908 plays context‐dependent roles in tumor biology. In colorectal cancer, it is upregulated and promotes cell proliferation by modulating cell cycle regulators and suppressing intrinsic apoptosis through activation of caspase‐mediated pathways. In hepatocellular carcinoma, high LINC00908 levels enhance cell migration and viability by binding to and stabilizing the oncogenic transcription factor Sox‐4, thereby contributing to tumor progression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In contrast, in prostate cancer LINC00908 is downregulated and functions as a tumor suppressor by competitively binding to miR‑483‑5p, which results in the upregulation of TSPYL5 and inhibition of cell proliferation, migration, and invasion."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " Moreover, in triple‐negative breast cancer LINC00908 encodes a small regulatory peptide (ASRPS) that binds STAT3, reducing its phosphorylation and subsequent VEGF expression, which in turn limits angiogenesis and tumor growth."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": " Finally, higher expression of LINC00908 is also associated with advanced tumor grade and poorer prognosis in glioma, highlighting its potential as a prognostic biomarker."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": " Together, these findings underscore the complex and cancer type–specific functions of LINC00908, providing a rationale for its further evaluation as both a biomarker and a therapeutic target.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Ti-Dong Shan, Zi-Bin Tian, Qian Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long intergenic noncoding RNA 00908 promotes proliferation and inhibits apoptosis of colorectal cancer cells by regulating KLF5 expression."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Physiol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jcp.29899"}], "href": "https://doi.org/10.1002/jcp.29899"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33020901"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33020901"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Xinhua Hu, Qingxiang Li, Jinfeng Zhang "}, {"type": "b", "children": [{"type": "t", "text": "The Long Noncoding RNA LINC00908 Facilitates Hepatocellular Carcinoma Progression Via Interaction With Sox-4."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Manag Res (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.2147/CMAR.S216774"}], "href": "https://doi.org/10.2147/CMAR.S216774"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31632138"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31632138"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Li Fan, Hai Li, Yun Zhang "}, {"type": "b", "children": [{"type": "t", "text": "LINC00908 negatively regulates microRNA-483-5p to increase TSPYL5 expression and inhibit the development of prostate cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Cell Int (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12935-019-1073-x"}], "href": "https://doi.org/10.1186/s12935-019-1073-x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31938018"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31938018"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Yirong Wang, Siqi Wu, Xun Zhu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA-encoded polypeptide ASRPS inhibits triple-negative breast cancer angiogenesis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Exp Med (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1084/jem.20190950"}], "href": "https://doi.org/10.1084/jem.20190950"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31816634"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31816634"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Lianhao Song, Shengkun Zhang, Chenwei Duan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Genome-wide identification of lncRNAs as novel prognosis biomarkers of glioma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Biochem (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jcb.29259"}], "href": "https://doi.org/10.1002/jcb.29259"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31297871"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31297871"}]}]}]}
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| NCBI Gene ID | 284276 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC00908 has 828 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 11 datasets.
Click the + buttons to view associations for LINC00908 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00908 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00908 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of LINC00908 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations | transcription factor perturbations changing expression of LINC00908 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of LINC00908 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of LINC00908 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| HPA Tissue Gene Expression Profiles | tissues with high or low expression of LINC00908 gene relative to other tissues from the HPA Tissue Gene Expression Profiles dataset. | |
| HPA Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of LINC00908 gene relative to other tissue samples from the HPA Tissue Sample Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00908 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of LINC00908 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles | cell types and tissues with high or low DNA methylation of LINC00908 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset. | |