| Name | long intergenic non-protein coding RNA 910 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC00910 is emerging as a multifunctional long intergenic non‐coding RNA that, by analogy with other lincRNAs, appears to regulate gene expression at multiple levels. Studies using long‐range chromatin interaction analyses indicate that lincRNAs may display both promoter‐like and enhancer‐like activities, thereby positioning themselves to modulate transcription by bridging distant genomic loci and altering local chromatin environments."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In this context, LINC00910 is postulated to facilitate RNA‐mediated regulation of gene expression through its capacity to act in spatially distinct genomic regions, suggesting that such interactions are potential mechanisms by which it could influence disease–associated gene networks. Furthermore, evidence from transcriptome and RNA–binding protein profiling studies demonstrates that lincRNAs impact post–transcriptional processes, including alternative splicing, with effects that are highly cell type–specific; LINC00910 may similarly modulate splicing decisions by altering the local protein–RNA interaction landscape."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " In oncology, lincRNA expression signatures have been shown to stratify patient risk and predict outcomes in breast cancer, hinting at the potential prognostic value of LINC00910 if dysregulated, as well as its involvement in broader tumorigenic processes."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": " Additionally, lincRNAs implicated in cancer have been observed to undergo epigenetic modifications at enhancer regions—mediated, for example, by changes in DNMT3B binding—thereby participating in the repression of oncogenic targets; this suggests that LINC00910 might also contribute to epigenetic reprogramming in malignant cells."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": " Although less directly referenced, related analyses in gastric cancer further support the notion that novel lincRNAs can regulate cell proliferation and other critical cellular processes."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": " Collectively, these findings imply that LINC00910 functions as a versatile regulator, integrating chromatin interactions, modulation of transcription and alternative splicing, and epigenetic control to orchestrate complex gene regulatory networks with significant implications in cancer and other diseases.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Liuyang Cai, Huidan Chang, Yaping Fang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A Comprehensive Characterization of the Function of LincRNAs in Transcriptional Regulation Through Long-Range Chromatin Interactions."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/srep36572"}], "href": "https://doi.org/10.1038/srep36572"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27824113"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27824113"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Denise Thiel, Nataša Djurdjevac Conrad, Evgenia Ntini, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identifying lncRNA-mediated regulatory modules via ChIA-PET network analysis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "BMC Bioinformatics (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12859-019-2900-8"}], "href": "https://doi.org/10.1186/s12859-019-2900-8"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31142264"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31142264"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Felipe Wendt Porto, Swapna Vidhur Daulatabad, Sarath Chandra Janga "}, {"type": "b", "children": [{"type": "t", "text": "Long Non-Coding RNA Expression Levels Modulate Cell-Type-Specific Splicing Patterns by Altering Their Interaction Landscape with RNA-Binding Proteins."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Genes (Basel) (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3390/genes10080593"}], "href": "https://doi.org/10.3390/genes10080593"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31390792"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31390792"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Jianing Tang, Jiangbo Ren, Qiuxia Cui, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A prognostic 10-lncRNA expression signature for predicting the risk of tumour recurrence in breast cancer patients."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Mol Med (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/jcmm.14556"}], "href": "https://doi.org/10.1111/jcmm.14556"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31429520"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31429520"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Sadaf Harandi-Zadeh, Cayla Boycott, Megan Beetch, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Pterostilbene Changes Epigenetic Marks at Enhancer Regions of Oncogenes in Breast Cancer Cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Antioxidants (Basel) (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3390/antiox10081232"}], "href": "https://doi.org/10.3390/antiox10081232"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34439480"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34439480"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Zhi Lv, Liping Sun, Qian Xu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Joint analysis of lncRNA m"}, {"type": "a", "children": [{"type": "t", "text": "sup"}], "href": "sup"}, {"type": "t", "text": "6"}, {"type": "a", "children": [{"type": "t", "text": "/sup"}], "href": "/sup"}, {"type": "t", "text": "A methylome and lncRNA/mRNA expression profiles in gastric cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Cell Int (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12935-020-01554-8"}], "href": "https://doi.org/10.1186/s12935-020-01554-8"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32982586"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32982586"}]}]}]}
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| NCBI Gene ID | 100130581 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC00910 has 776 functional associations with biological entities spanning 3 categories (chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 11 datasets.
Click the + buttons to view associations for LINC00910 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq | tissue samples with high or low expression of LINC00910 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00910 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00910 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of LINC00910 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of LINC00910 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of LINC00910 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of LINC00910 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| GTEx Tissue-Specific Aging Signatures | tissue samples with high or low expression of LINC00910 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00910 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles | cell lines with high or low expression of LINC00910 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset. | |
| Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles | cell types and tissues with high or low DNA methylation of LINC00910 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset. | |