| Name | long intergenic non-protein coding RNA 924 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC00924 has been implicated in multiple malignancies with context‐dependent roles. In hepatitis B virus–related hepatocellular carcinoma, reduced LINC00924 expression is associated with poor clinical outcomes. Experimental data indicate that LINC00924 acts as a tumor suppressor by inhibiting cell invasion and the epithelial–mesenchymal transition via a mechanism involving the sponging of miR‑6755‑5p, which in turn elevates NDRG2 expression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " \n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n In contrast, in the context of advanced gastric cancer with peritoneal metastasis, LINC00924 is up‑regulated, especially when gastric cancer cells are exposed to an adipocyte‐rich environment that mimics the peritoneal microenvironment. Elevated LINC00924 in this setting is significantly associated with reduced overall survival, altered tumor immune infiltration (notably CD8+ cells), and a poorer response to immune checkpoint blockade therapies, suggesting that it may serve as a potential immunotherapeutic target."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Furthermore, in thyroid cancer, lower expression of LINC00924 correlates with longer disease‑free survival. Bioinformatics analyses have implicated LINC00924, along with other long noncoding RNAs, in the regulation of processes such as RNA metabolism, cell migration, and organelle assembly, highlighting its potential as a biomarker for disease prognosis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Although differential gene expression analyses in conditions such as Hirschsprung’s disease have been performed"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": ", the specific role of LINC00924 in this developmental disorder remains to be further elucidated.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Kai Yu, Yunhua Mei, Zhongyi Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA LINC00924 upregulates NDRG2 to inhibit epithelial-mesenchymal transition via sponging miR-6755-5p in hepatitis B virus-related hepatocellular carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Med Virol (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jmv.27578"}], "href": "https://doi.org/10.1002/jmv.27578"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34997970"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34997970"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Yan Fang, Sihao Huang, Lei Han, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Comprehensive Analysis of Peritoneal Metastasis Sequencing Data to Identify LINC00924 as a Prognostic Biomarker in Gastric Cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Manag Res (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.2147/CMAR.S318704"}], "href": "https://doi.org/10.2147/CMAR.S318704"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34285580"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34285580"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Yuansheng Rao, Haiying Liu, Xiaojuan Yan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "In Silico Analysis Identifies Differently Expressed lncRNAs as Novel Biomarkers for the Prognosis of Thyroid Cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Comput Math Methods Med (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1155/2020/3651051"}], "href": "https://doi.org/10.1155/2020/3651051"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32377223"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32377223"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Xiaoguang Niu, Yongtao Xu, Ni Gao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Weighted Gene Coexpression Network Analysis Reveals the Critical lncRNAs and mRNAs in Development of Hirschsprung's Disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Comput Biol (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1089/cmb.2019.0261"}], "href": "https://doi.org/10.1089/cmb.2019.0261"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31647312"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31647312"}]}]}]}
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| NCBI Gene ID | 145820 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC00924 has 660 functional associations with biological entities spanning 4 categories (chemical, functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 11 datasets.
Click the + buttons to view associations for LINC00924 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00924 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00924 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of LINC00924 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of LINC00924 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of LINC00924 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of LINC00924 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| GTEx Tissue-Specific Aging Signatures | tissue samples with high or low expression of LINC00924 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00924 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| LOCATE Predicted Protein Localization Annotations | cellular components predicted to contain LINC00924 protein from the LOCATE Predicted Protein Localization Annotations dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of LINC00924 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles | cell types and tissues with high or low DNA methylation of LINC00924 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset. | |