LINC00926 Gene

Name long intergenic non-protein coding RNA 926
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Long non‐coding RNA LINC00926 has emerged as a multifunctional regulator in both cancer and inflammatory diseases. In breast cancer, LINC00926 functions as a tumor suppressor by downregulating the glycolytic enzyme PGK1; it enhances PGK1 ubiquitination via the E3 ligase STUB1 and forms part of a FOXO3A‐mediated regulatory axis that modulates glycolysis, tumor growth, and metastasis, with higher LINC00926 levels correlating with better clinical outcomes."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In addition, in the context of post‐traumatic stress disorder, upregulation of LINC00926 promotes the recruitment of the histone methyltransferase MLL1 to the WNT10B promoter, thereby increasing H3K4 trimethylation and the expression of inflammatory cytokines such as IFNG and IL17A."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " Moreover, LINC00926 appears as a protective factor in prognostic models based on lipid metabolism‐related long non‐coding RNAs in breast cancer"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "and is also included in an immune infiltration‐associated lncRNA signature that independently correlates with overall survival in colon cancer patients."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Zhong Chu, Nan Huo, Xiang Zhu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "FOXO3A-induced LINC00926 suppresses breast tumor growth and metastasis through inhibition of PGK1-mediated Warburg effect."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Ther (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.ymthe.2021.04.036"}], "href": "https://doi.org/10.1016/j.ymthe.2021.04.036"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33940159"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33940159"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Marpe Bam, Xiaoming Yang, Jay P Ginsberg, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA LINC00926 regulates WNT10B signaling pathway thereby altering inflammatory gene expression in PTSD."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Transl Psychiatry (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41398-022-01971-5"}], "href": "https://doi.org/10.1038/s41398-022-01971-5"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35551428"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35551428"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Guo-Jian Shi, Qin Zhou, Qi Zhu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A novel prognostic model associated with the overall survival in patients with breast cancer based on lipid metabolism-related long noncoding RNAs."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Clin Lab Anal (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jcla.24384"}], "href": "https://doi.org/10.1002/jcla.24384"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35441740"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35441740"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Yanbo Wang, Jing Liu, Fenghai Ren, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification and Validation of a Four-Long Non-coding RNA Signature Associated With Immune Infiltration and Prognosis in Colon Cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Genet (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3389/fgene.2021.671128"}], "href": "https://doi.org/10.3389/fgene.2021.671128"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34290738"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34290738"}]}]}]}
NCBI Gene ID 283663
API
Download Associations
Predicted Functions View LINC00926's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC00926's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC00926's ARCHS4 Predicted Functions.

Functional Associations

LINC00926 has 969 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 15 datasets.

Click the + buttons to view associations for LINC00926 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles tissues with high or low expression of LINC00926 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset.
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq tissue samples with high or low expression of LINC00926 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset.
Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles tissues with high or low expression of LINC00926 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00926 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
CellMarker Gene-Cell Type Associations cell types associated with LINC00926 gene from the CellMarker Gene-Cell Type Associations dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of LINC00926 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations transcription factor perturbations changing expression of LINC00926 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of LINC00926 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of LINC00926 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
GTEx Tissue-Specific Aging Signatures tissue samples with high or low expression of LINC00926 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset.
HuBMAP Azimuth Cell Type Annotations cell types associated with LINC00926 gene from the HuBMAP Azimuth Cell Type Annotations dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00926 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles cell lines with high or low expression of LINC00926 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of LINC00926 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles cell types and tissues with high or low DNA methylation of LINC00926 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset.