LINC00942 Gene

Name long intergenic non-protein coding RNA 942
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC00942 is increasingly recognized as an oncogenic long non‐coding RNA whose aberrant up‐regulation has been observed in multiple human cancers, including lung adenocarcinoma, hepatocellular carcinoma, clear cell renal cell carcinoma, and gastric cancer. In lung adenocarcinoma, for example, LINC00942 acts as a competing endogenous RNA (ceRNA) by sequestering miR‑5006‑5p. This sequestration relieves the repression of FZD1 and thereby promotes Wnt/β‑catenin signaling, which in turn enhances cell proliferation, migration, and invasion while inhibiting apoptosis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n In addition, LINC00942 has been identified as a key component of multiple prognostic and diagnostic ceRNA networks. It is incorporated into panels—such as ferroptosis‑ and immune‑related lncRNA signatures—in hepatocellular carcinoma and other tumor types, underscoring its potential as a biomarker for disease progression and patient outcome."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "3", "end_ref": "6"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Moreover, in gastric cancer, elevated levels of LINC00942 (also referred to as LNC942) have been linked to chemoresistance. Here, increased expression of LINC00942 impairs cellular apoptosis and promotes cancer stemness by up‑regulating the RNA binding protein MSI2, thereby contributing to resistance against cisplatin‑based chemotherapy."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Similar observations have been noted in the context of clear cell renal cell carcinoma, where LINC00942 is part of a ceRNA network associated with enhanced malignancy."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": " Finally, beyond oncogenesis, genomic alterations involving LINC00942 have been reported in neurodevelopmental disorders such as autism spectrum disorder, although its direct mechanistic contribution in this context remains to be fully elucidated."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Ronghua Wang, Xiuyun Wang, Jingtao Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00942 Promotes Tumor Proliferation and Metastasis in Lung Adenocarcinoma via FZD1 Upregulation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Technol Cancer Res Treat (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1177/1533033820977526"}], "href": "https://doi.org/10.1177/1533033820977526"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34253104"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34253104"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Huihui Hu, Hangdi Xu, Fen Lu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Exploring the Effect of Differentially Expressed Long Non-coding RNAs Driven by Copy Number Variation on Competing Endogenous RNA Network by Mining Lung Adenocarcinoma Data."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Cell Dev Biol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3389/fcell.2020.627436"}], "href": "https://doi.org/10.3389/fcell.2020.627436"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33585468"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33585468"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Yimeng Cui, Yaowen Cui, Ruixue Gu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of Differentially Expressed and Prognostic lncRNAs for the Construction of ceRNA Networks in Lung Adenocarcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Oncol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1155/2021/2659550"}], "href": "https://doi.org/10.1155/2021/2659550"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34987577"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34987577"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Chongkai Fang, Silin Liu, Kunliang Feng, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Ferroptosis-related lncRNA signature predicts the prognosis and immune microenvironment of hepatocellular carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41598-022-10508-1"}], "href": "https://doi.org/10.1038/s41598-022-10508-1"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35459272"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35459272"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Zhijie Xu, Bi Peng, Qiuju Liang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Construction of a Ferroptosis-Related Nine-lncRNA Signature for Predicting Prognosis and Immune Response in Hepatocellular Carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Immunol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3389/fimmu.2021.719175"}], "href": "https://doi.org/10.3389/fimmu.2021.719175"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34603293"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34603293"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Qianhui Xu, Yuxin Wang, Wen Huang "}, {"type": "b", "children": [{"type": "t", "text": "Identification of immune-related lncRNA signature for predicting immune checkpoint blockade and prognosis in hepatocellular carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int Immunopharmacol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.intimp.2020.107333"}], "href": "https://doi.org/10.1016/j.intimp.2020.107333"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33486322"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33486322"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Yiran Zhu, Bingluo Zhou, Xinyang Hu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA LINC00942 promotes chemoresistance in gastric cancer by suppressing MSI2 degradation to enhance c-Myc mRNA stability."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Clin Transl Med (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/ctm2.703"}], "href": "https://doi.org/10.1002/ctm2.703"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35073459"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35073459"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Rui Zhu, Xiezhao Li, Zhiduan Cai, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Risk Scores Based on Six Survival-Related RNAs in a Competing Endogenous Network Composed of Differentially Expressed RNAs Between Clear Cell Renal Cell Carcinoma Patients Carrying Wild-Type or Mutant Von Hippel-Lindau Serve Well to Predict Malignancy and Prognosis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Oncol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3389/fonc.2021.726671"}], "href": "https://doi.org/10.3389/fonc.2021.726671"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34760693"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34760693"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Isabela M W Silva, Jill Rosenfeld, Sergio A Antoniuk, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A 1.5Mb terminal deletion of 12p associated with autism spectrum disorder."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Gene (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.gene.2014.02.058"}], "href": "https://doi.org/10.1016/j.gene.2014.02.058"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24613754"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24613754"}]}]}]}
NCBI Gene ID 100292680
API
Download Associations
Predicted Functions View LINC00942's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC00942's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC00942's ARCHS4 Predicted Functions.

Functional Associations

LINC00942 has 496 functional associations with biological entities spanning 3 categories (disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA) extracted from 12 datasets.

Click the + buttons to view associations for LINC00942 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles tissues with high or low expression of LINC00942 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00942 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00942 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of LINC00942 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Kinase Perturbations kinase perturbations changing expression of LINC00942 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations transcription factor perturbations changing expression of LINC00942 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of LINC00942 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of LINC00942 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
HuGE Navigator Gene-Phenotype Associations phenotypes associated with LINC00942 gene by text-mining GWAS publications from the HuGE Navigator Gene-Phenotype Associations dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00942 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of LINC00942 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles cell types and tissues with high or low DNA methylation of LINC00942 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset.