| Name | long intergenic non-protein coding RNA 943 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC00943 is a long intergenic non‐coding RNA that has emerged as an important regulatory molecule in diverse diseases. In the context of Parkinson’s disease, several studies have demonstrated that LINC00943 is markedly up‐regulated in toxin‐induced models (using MPP⁺/MPTP), where its elevated expression is associated with neuronal injury. Mechanistically, LINC00943 appears to function as a competing endogenous RNA that sponges microRNAs (such as miR‑338‑3p and miR‑7‑5p), thereby modulating downstream effectors (including SP1 and CXCL12) involved in inflammation, oxidative stress, and apoptosis; accordingly, knockdown of LINC00943 alleviates neurodegeneration and may represent a potential therapeutic strategy."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "4"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n In oncology, LINC00943 has been identified as a hub gene in the competitive endogenous RNA network of cutaneous melanoma, where its dysregulated expression is closely linked to tumorigenesis and serves as an independent prognostic indicator."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": " Similarly, in clear cell renal cell carcinoma, LINC00943 is integrated into a prognostic risk model based on ceRNA interactions, suggesting its involvement in disease pathogenesis and its potential utility as a biomarker."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Moreover, in gastric cancer, overexpression of LINC00943 correlates with poor patient prognosis; functional studies indicate that LINC00943 promotes cancer cell proliferation and chemoresistance by regulating hsa‑miR‑101‑3p, an interaction that may offer new avenues for therapeutic intervention."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Chunming Meng, Jing Gao, Qingyuan Ma, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00943 knockdown attenuates MPP"}, {"type": "a", "children": [{"type": "t", "text": "sup"}], "href": "sup"}, {"type": "t", "text": "+"}, {"type": "a", "children": [{"type": "t", "text": "/sup"}], "href": "/sup"}, {"type": "t", "text": "-induced neuronal damage via miR-15b-5p/RAB3IP axis in SK-N-SH cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neurol Res (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1080/01616412.2020.1834290"}], "href": "https://doi.org/10.1080/01616412.2020.1834290"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33208053"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33208053"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Xiaoming Sun, Chunyuan Zhang, Hong Tao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00943 acts as miR-338-3p sponge to promote MPP"}, {"type": "a", "children": [{"type": "t", "text": "sup"}], "href": "sup"}, {"type": "t", "text": "+"}, {"type": "a", "children": [{"type": "t", "text": "/sup"}], "href": "/sup"}, {"type": "t", "text": "-induced SK-N-SH cell injury by directly targeting SP1 in Parkinson's disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Brain Res (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.brainres.2022.147814"}], "href": "https://doi.org/10.1016/j.brainres.2022.147814"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35123924"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35123924"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Han Lian, Baohua Wang, Quan Lu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00943 knockdown exerts neuroprotective effects in Parkinson's disease through regulates CXCL12 expression by sponging miR-7-5p."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Genes Genomics (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s13258-021-01084-1"}], "href": "https://doi.org/10.1007/s13258-021-01084-1"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33886117"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33886117"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Xueqin Li, Yan Su, Na Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Berberine Attenuates MPP"}, {"type": "a", "children": [{"type": "t", "text": "sup"}], "href": "sup"}, {"type": "t", "text": "+"}, {"type": "a", "children": [{"type": "t", "text": "/sup"}], "href": "/sup"}, {"type": "t", "text": "-Induced Neuronal Injury by Regulating LINC00943/miR-142-5p/KPNA4/NF-κB Pathway in SK-N-SH Cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neurochem Res (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s11064-021-03431-w"}], "href": "https://doi.org/10.1007/s11064-021-03431-w"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34427876"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34427876"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Junyou Zhu, Jin Deng, Lijun Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Reconstruction of lncRNA-miRNA-mRNA network based on competitive endogenous RNA reveals functional lncRNAs in skin cutaneous melanoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "BMC Cancer (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12885-020-07302-5"}], "href": "https://doi.org/10.1186/s12885-020-07302-5"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32993558"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32993558"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Yuke Zhang, Jiangwen Dai, Weifeng Huang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of a competing endogenous RNA network related to immune signature in clear cell renal cell carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Aging (Albany NY) (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.18632/aging.203784"}], "href": "https://doi.org/10.18632/aging.203784"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34958632"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34958632"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Yan Xu, Tongzhen Ji, Ning An, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00943 is correlated with gastric cancer and regulates cancer cell proliferation and chemosensitivity via hsa-miR-101-3p."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int J Clin Oncol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s10147-021-01945-5"}], "href": "https://doi.org/10.1007/s10147-021-01945-5"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34086111"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34086111"}]}]}]}
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| NCBI Gene ID | 100507206 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC00943 has 400 functional associations with biological entities spanning 1 categories (cell line, cell type or tissue) extracted from 7 datasets.
Click the + buttons to view associations for LINC00943 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00943 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| CellMarker Gene-Cell Type Associations | cell types associated with LINC00943 gene from the CellMarker Gene-Cell Type Associations dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00943 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of LINC00943 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of LINC00943 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| HuBMAP Azimuth Cell Type Annotations | cell types associated with LINC00943 gene from the HuBMAP Azimuth Cell Type Annotations dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00943 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |