| Name | long intergenic non-protein coding RNA 944 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Long non‐coding RNA LINC00944 has emerged as a potentially important regulator in cancer through its involvement in both immune modulation and tumor progression. In breast cancer, LINC00944 expression is regulated by the RNA‐editing enzyme ADAR1, with its up‐ or downregulation being closely linked to immune signaling pathways. Notably, higher levels of LINC00944 are strongly correlated with increased tumor-infiltrating T lymphocytes, elevated pro-apoptotic markers, and clinical features such as tumor size and hormone receptor status; furthermore, reduced expression of LINC00944 is associated with poorer patient prognosis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In renal cell carcinoma, LINC00944 is significantly overexpressed in patient tissues and cell lines, with high levels correlating with advanced tumor stage and unfavorable survival outcomes. Functional assays demonstrated that knocking down LINC00944 impairs cell proliferation and migration while modulating Akt phosphorylation, indicating an oncogenic role in RCC."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Pamela R de Santiago, Alejandro Blanco, Fernanda Morales, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Immune-related IncRNA LINC00944 responds to variations in ADAR1 levels and it is associated with breast cancer prognosis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Life Sci (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.lfs.2020.118956"}], "href": "https://doi.org/10.1016/j.lfs.2020.118956"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33383047"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33383047"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Chiheng Chen, Hanxiong Zheng "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA LINC00944 Promotes Tumorigenesis but Suppresses Akt Phosphorylation in Renal Cell Carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Mol Biosci (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3389/fmolb.2021.697962"}], "href": "https://doi.org/10.3389/fmolb.2021.697962"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34291088"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34291088"}]}]}]}
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| NCBI Gene ID | 387895 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC00944 has 379 functional associations with biological entities spanning 3 categories (functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 7 datasets.
Click the + buttons to view associations for LINC00944 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00944 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00944 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of LINC00944 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of LINC00944 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of LINC00944 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00944 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| LOCATE Predicted Protein Localization Annotations | cellular components predicted to contain LINC00944 protein from the LOCATE Predicted Protein Localization Annotations dataset. | |