LINC00958 Gene

Name long intergenic non-protein coding RNA 958
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC00958 is a long non‐coding RNA that is aberrantly upregulated in a wide variety of human cancers and other disease conditions, where it functions as an oncogenic regulator by modulating diverse cellular processes. In malignant settings such as hepatocellular carcinoma"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ", bladder cancer"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": ", glioma"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": ", pancreatic cancer"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": ", cervical cancer"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": ", oral and tongue squamous cell carcinomas"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": ", non‐small cell lung cancer"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": ", colorectal cancer"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": ", and nasopharyngeal carcinoma"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "10"}]}, {"type": "t", "text": ", LINC00958 promotes tumorigenesis by enhancing proliferation, migration, invasion, and epithelial–mesenchymal transition; it also contributes to treatment resistance. \n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Mechanistically, LINC00958 frequently serves as a competing endogenous RNA (ceRNA), “sponging” several tumor‐suppressive microRNAs—including miR-3619-5p, miR-625-5p, miR-203, miR-185-5p, miR-211-5p, and miR-204-3p—and thereby derepressing the expression of downstream oncogenes (e.g., HDGF, LRRC8E, CDK2, PAX8, YWHAZ, CENPK, KIF2A, NUAK1, and MAPK1). These interactions lead to activation of key signaling pathways, such as JNK/c-JUN, AKT/mTOR, and PI3K/AKT, which further drive tumor progression and aggressive phenotypes."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}, {"type": "fg_f", "ref": "3"}, {"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": " \n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Beyond its oncogenic roles, LINC00958 is also implicated in non-malignant pathologies. For example, in intervertebral disc degeneration, elevated LINC00958 promotes nucleus pulposus cell proliferation and extracellular matrix degradation by sponging miR-203 and upregulating targets such as SMAD3."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "11"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Collectively, these findings highlight the pivotal role of LINC00958 as a multifunctional regulator—serving not only as a promising prognostic biomarker but also as a potential therapeutic target across a broad spectrum of cancers and degenerative diseases.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Xueliang Zuo, Zhiqiang Chen, Wen Gao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "M6A-mediated upregulation of LINC00958 increases lipogenesis and acts as a nanotherapeutic target in hepatocellular carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Hematol Oncol (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s13045-019-0839-x"}], "href": "https://doi.org/10.1186/s13045-019-0839-x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31915027"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31915027"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Wang He, Guangzheng Zhong, Ning Jiang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long noncoding RNA BLACAT2 promotes bladder cancer-associated lymphangiogenesis and lymphatic metastasis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Clin Invest (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1172/JCI96218"}], "href": "https://doi.org/10.1172/JCI96218"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29355840"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29355840"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Erkun Guo, Chaohui Liang, Xin He, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long Noncoding RNA LINC00958 Accelerates Gliomagenesis Through Regulating miR-203/CDK2."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "DNA Cell Biol (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1089/dna.2018.4163"}], "href": "https://doi.org/10.1089/dna.2018.4163"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29570358"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29570358"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Shi Chen, Jiang-Zhi Chen, Jia-Qiang Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Silencing of long noncoding RNA LINC00958 prevents tumor initiation of pancreatic cancer by acting as a sponge of microRNA-330-5p to down-regulate PAX8."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Lett (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.canlet.2018.12.017"}], "href": "https://doi.org/10.1016/j.canlet.2018.12.017"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30639194"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30639194"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Lifeng Wang, Yanbo Zhong, Baohua Yang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00958 facilitates cervical cancer cell proliferation and metastasis by sponging miR-625-5p to upregulate LRRC8E expression."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Biochem (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jcb.29472"}], "href": "https://doi.org/10.1002/jcb.29472"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31691355"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31691355"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Zongsheng Wang, Xuemei Zhu, Pengfei Dong, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long noncoding RNA LINC00958 promotes the oral squamous cell carcinoma by sponging miR-185-5p/YWHAZ."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Life Sci (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.lfs.2019.116782"}], "href": "https://doi.org/10.1016/j.lfs.2019.116782"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31442551"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31442551"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Bo Jia, Junfeng Dao, Jiusong Han, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00958 promotes the proliferation of TSCC via miR-211-5p/CENPK axis and activating the JAK/STAT3 signaling pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Cell Int (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12935-021-01808-z"}], "href": "https://doi.org/10.1186/s12935-021-01808-z"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33658048"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33658048"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Zhigang Luo, Zhiyi Han, Feng Shou, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00958 Accelerates Cell Proliferation and Migration in Non-Small Cell Lung Cancer Through JNK/c-JUN Signaling."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Gene Ther Methods (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1089/hgtb.2019.115"}], "href": "https://doi.org/10.1089/hgtb.2019.115"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31855084"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31855084"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Ye Sun, Yi Liu, Yun Cai, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Downregulation of LINC00958 inhibits proliferation, invasion and migration, and promotes apoptosis of colorectal cancer cells by targeting miR‑3619‑5p."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncol Rep (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/or.2020.7707"}], "href": "https://doi.org/10.3892/or.2020.7707"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32945474"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32945474"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Meijuan Chen, Zhina Xu, Yingyao Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00958 Promotes The Malignancy Of Nasopharyngeal Carcinoma By Sponging microRNA-625 And Thus Upregulating NUAK1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Onco Targets Ther (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.2147/OTT.S216342"}], "href": "https://doi.org/10.2147/OTT.S216342"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31819474"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31819474"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Kunchi Zhao, Yang Zhang, Hongping Yuan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long noncoding RNA LINC00958 accelerates the proliferation and matrix degradation of the nucleus pulposus by regulating miR-203/SMAD3."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Aging (Albany NY) (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.18632/aging.102436"}], "href": "https://doi.org/10.18632/aging.102436"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31804973"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31804973"}]}]}]}
NCBI Gene ID 100506305
API
Download Associations
Predicted Functions View LINC00958's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC00958's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC00958's ARCHS4 Predicted Functions.

Functional Associations

LINC00958 has 354 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 6 datasets.

Click the + buttons to view associations for LINC00958 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00958 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of LINC00958 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations transcription factor perturbations changing expression of LINC00958 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of LINC00958 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of LINC00958 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00958 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.