LINC00963 Gene

Name long intergenic non-protein coding RNA 963
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Long intergenic non‐coding RNA 00963 (LINC00963) has emerged as an important regulator in diverse pathological contexts, most notably in cancer. Elevated LINC00963 expression has been observed in non‐small cell lung cancer where its high levels correlate with poor prognosis by promoting cell migration and invasion."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In prostate cancer, LINC00963 drives the transition from androgen‐dependent to more aggressive castration‐resistant disease by enhancing proliferation and metastasis through modulation of the EGFR signaling pathway and induction of epithelial–mesenchymal transition."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " Similarly, in esophageal squamous cell carcinoma and colorectal cancer, LINC00963 functions as a competing endogenous RNA by sponging tumor‐suppressive microRNAs (e.g. miR‑214‑5p, miR‑10b, miR‑1281, or miR‑532‑3p), thereby upregulating oncogenic targets that enhance proliferation, invasion, and metastasis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": " In gastric cancer, its upregulation contributes to chemoresistance by promoting autophagy via a miR‑4458/ATG16L1 axis"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": ", while in bladder cancer, LINC00963 enhances malignant phenotypes through regulation of the miR‑766‑3p/MTA1 pathway."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": " Outside the realm of traditional tumors, aberrant LINC00963 expression has also been linked to non-malignant conditions such as pulmonary arterial hypertension, where it modulates smooth muscle cell proliferation and migration via the miR‑328‑3p/PFN1 axis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": " Mechanistically, LINC00963 generally operates by “sponging” specific microRNAs, thereby de-repressing downstream oncogenes or effectors (e.g. TRIM65 in colorectal cancer) and activating key signaling cascades including PI3K/AKT, EGFR, JAK2/STAT1, and pathways underlying epithelial–mesenchymal transition."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": " Collectively, these findings indicate that LINC00963 acts as a pleiotropic driver of tumor progression and drug resistance across multiple cancer types, positioning it as a promising prognostic biomarker and potential therapeutic target.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Tao Yu, Yingjun Zhao, Zhixiang Hu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "MetaLnc9 Facilitates Lung Cancer Metastasis via a PGK1-Activated AKT/mTOR Pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Res (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1158/0008-5472.CAN-17-0671"}], "href": "https://doi.org/10.1158/0008-5472.CAN-17-0671"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28923857"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28923857"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Lijuan Wang, Suxia Han, Guihua Jin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Linc00963: a novel, long non-coding RNA involved in the transition of prostate cancer from androgen-dependence to androgen-independence."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int J Oncol (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/ijo.2014.2363"}], "href": "https://doi.org/10.3892/ijo.2014.2363"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24691949"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24691949"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Feng Sun, Ke Wu, Zhixian Yao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long noncoding RNA LINC00963 induces NOP2 expression by sponging tumor suppressor miR-542-3p to promote metastasis in prostate cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Aging (Albany NY) (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.18632/aging.103236"}], "href": "https://doi.org/10.18632/aging.103236"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32554858"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32554858"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "H-F Liu, Q Zhen, Y-K Fan "}, {"type": "b", "children": [{"type": "t", "text": "LINC00963 predicts poor prognosis and promotes esophageal cancer cells invasion via targeting miR-214-5p/RAB14 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Eur Rev Med Pharmacol Sci (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.26355/eurrev_202001_19907"}], "href": "https://doi.org/10.26355/eurrev_202001_19907"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31957829"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31957829"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Yujin Wu, Longling Cong, Wenjian Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "lncRNA LINC00963 downregulation regulates colorectal cancer tumorigenesis and progression via the miR‑10b/FGF13 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Med Rep (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/mmr.2021.11850"}], "href": "https://doi.org/10.3892/mmr.2021.11850"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33495804"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33495804"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Meng Hou, Chao Li, Shunbin Dong "}, {"type": "b", "children": [{"type": "t", "text": "LINC00963/miR-4458 regulates the effect of oxaliplatin in gastric cancer by mediating autophagic flux through targeting of ATG16L1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41598-021-98728-9"}], "href": "https://doi.org/10.1038/s41598-021-98728-9"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34697403"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34697403"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Ning Zhou, Xiaofei Zhu, Libo Man "}, {"type": "b", "children": [{"type": "t", "text": "LINC00963 Functions as an Oncogene in Bladder Cancer by Regulating the miR-766-3p/MTA1 Axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Manag Res (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.2147/CMAR.S249979"}], "href": "https://doi.org/10.2147/CMAR.S249979"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32494199"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32494199"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Chengpeng Yang, Rong Rong, Yuze Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Decrease in LINC00963 attenuates the progression of pulmonary arterial hypertension via microRNA-328-3p/profilin 1 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Clin Lab Anal (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jcla.24383"}], "href": "https://doi.org/10.1002/jcla.24383"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35349725"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35349725"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Haidong Lv, Dixia Zhou, Guoqing Liu "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA LINC00963 promotes colorectal cancer cell proliferation and metastasis by regulating miR‑1281 and TRIM65."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Med Rep (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/mmr.2021.12421"}], "href": "https://doi.org/10.3892/mmr.2021.12421"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34498706"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34498706"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Feng Ye, Ronghua Xu, Yuanhong Ge, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00963 Confers Oncogenic Properties in Glioma by Regulating the miR-506/BCAT1 Axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Manag Res (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.2147/CMAR.S246332"}], "href": "https://doi.org/10.2147/CMAR.S246332"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32273770"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32273770"}]}]}]}
Synonyms MetaLnc9
NCBI Gene ID 100506190
API
Download Associations
Predicted Functions View LINC00963's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC00963's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC00963's ARCHS4 Predicted Functions.

Functional Associations

LINC00963 has 731 functional associations with biological entities spanning 4 categories (functional term, phrase or reference, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 11 datasets.

Click the + buttons to view associations for LINC00963 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00963 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
CellMarker Gene-Cell Type Associations cell types associated with LINC00963 gene from the CellMarker Gene-Cell Type Associations dataset.
GeneRIF Biological Term Annotations biological terms co-occuring with LINC00963 gene in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of LINC00963 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Kinase Perturbations kinase perturbations changing expression of LINC00963 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of LINC00963 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations transcription factor perturbations changing expression of LINC00963 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of LINC00963 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of LINC00963 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00963 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles cell lines with high or low expression of LINC00963 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset.