| Name | long intergenic non-protein coding RNA 970 |
| Summary |
{"type": "root", "children": [{"type": "t", "text": "<head>\n <meta charset=\"UTF-8\">\n <title>Summary of LINC00970 Function in FECD Studies</title>\n </head>\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Two independent studies investigated the genetic underpinnings of Fuchs endothelial corneal dystrophy (FECD). The first study focused on FECD cases with and without a CTG repeat expansion in the TCF4 gene and identified widespread RNA mis‐splicing as well as differences in the expression of 39 genes between the two patient cohorts."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " The second study, employing a genome‐wide association approach, identified three novel loci significantly associated with FECD."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Notably, neither abstract specifically discusses or provides evidence regarding the function of the long non‐coding RNA LINC00970. Although both studies shed light on various genetic factors and expression differences implicated in FECD, there is no direct mention or analysis of LINC00970’s role in disease pathophysiology. Therefore, based on the provided abstracts, the function of LINC00970 in the context of FECD remains undetermined, and further targeted research would be required to elucidate any potential involvement of this lncRNA in FECD.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Eric D Wieben, Ross A Aleff, Xiaojia Tang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Gene expression in the corneal endothelium of Fuchs endothelial corneal dystrophy patients with and without expansion of a trinucleotide repeat in TCF4."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0200005"}], "href": "https://doi.org/10.1371/journal.pone.0200005"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29966009"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29966009"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Natalie A Afshari, Robert P Igo, Nathan J Morris, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Genome-wide association study identifies three novel loci in Fuchs endothelial corneal dystrophy."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Commun (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ncomms14898"}], "href": "https://doi.org/10.1038/ncomms14898"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28358029"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28358029"}]}]}]}
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| NCBI Gene ID | 101978719 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC00970 has 5 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 2 datasets.
Click the + buttons to view associations for LINC00970 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of LINC00970 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of LINC00970 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |