LINC00971 Gene

Name long intergenic non-protein coding RNA 971
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n The three abstracts provided offer insights into diverse biomedical tools and systems—namely, neuroimaging of amyloid deposition in Alzheimer’s disease (a marker for pathology in AD)"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ", the identification of genomic safe harbor candidates via CNV analysis in a large Korean cohort"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": ", and the development of a precisely controlled CRISPR-Cas9 gene editing system."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " None of these abstracts, however, contain any information regarding the function of LINC00971. Consequently, based on the current set of abstracts, no functional summary of LINC00971 can be derived.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Qi Yan, Kwangsik Nho, Jorge L Del-Aguila, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Genome-wide association study of brain amyloid deposition as measured by Pittsburgh Compound-B (PiB)-PET imaging."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Psychiatry (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41380-018-0246-7"}], "href": "https://doi.org/10.1038/s41380-018-0246-7"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30361487"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30361487"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Eun-Seo Lee, Sanghoon Moon, Kwaku Dad Abu-Bonsrah, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Programmable Nuclease-Based Integration into Novel Extragenic Genomic Safe Harbor Identified from Korean Population-Based CNV Analysis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Ther Oncolytics (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.omto.2019.07.001"}], "href": "https://doi.org/10.1016/j.omto.2019.07.001"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31463366"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31463366"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Krzysztof Chylinski, Maria Hubmann, Ruth E Hanna, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CRISPR-Switch regulates sgRNA activity by Cre recombination for sequential editing of two loci."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Commun (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41467-019-13403-y"}], "href": "https://doi.org/10.1038/s41467-019-13403-y"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31784531"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31784531"}]}]}]}
NCBI Gene ID 440970
API
Download Associations
Predicted Functions View LINC00971's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC00971's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC00971's ARCHS4 Predicted Functions.

Functional Associations

LINC00971 has 151 functional associations with biological entities spanning 2 categories (functional term, phrase or reference, cell line, cell type or tissue) extracted from 4 datasets.

Click the + buttons to view associations for LINC00971 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00971 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of LINC00971 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00971 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
LOCATE Predicted Protein Localization Annotations cellular components predicted to contain LINC00971 protein from the LOCATE Predicted Protein Localization Annotations dataset.