LINC00999 Gene

Name long intergenic non-protein coding RNA 999
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n In hepatocellular carcinoma, recent high‐throughput sequencing studies have identified LINC00999 as one of several noncoding genomic regions that are frequently targeted by hepatitis B virus (HBV) DNA integration events. Such integrations, detected in tumor tissues, suggest that disruption or dysregulation of LINC00999 may contribute to the altered transcriptional landscape and malignant progression observed in HBV‐associated liver cancer."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n In a separate investigation addressing Kawasaki disease, competitive endogenous RNA (ceRNA) network analysis was performed to identify dysregulated long noncoding RNAs, microRNAs, and genes involved in the disease’s molecular mechanisms. Although detailed functional effects were not fully elaborated in the abstract, LINC00999 emerged as one of the differentially expressed lncRNAs participating in such ceRNA circuits. Its involvement implies a potential role in post‐transcriptional gene regulation processes that may affect inflammatory or immune pathways in Kawasaki disease; however, the precise functional contribution of LINC00999 in this context remains to be further elucidated."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Zebao He, Jiansheng Zhu, Jinggang Mo, et al. "}, {"type": "b", "children": [{"type": "t", "text": "HBV DNA integrates into upregulated ZBTB20 in patients with hepatocellular carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Med Rep (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/mmr.2020.11074"}], "href": "https://doi.org/10.3892/mmr.2020.11074"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32319639"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32319639"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Changsheng Guo, Yuanqing Hua, Zuanhao Qian "}, {"type": "b", "children": [{"type": "t", "text": "Differentially expressed genes, lncRNAs, and competing endogenous RNAs in Kawasaki disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PeerJ (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.7717/peerj.11169"}], "href": "https://doi.org/10.7717/peerj.11169"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34026343"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34026343"}]}]}]}
NCBI Gene ID 399744
API
Download Associations
Predicted Functions View LINC00999's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC00999's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC00999's ARCHS4 Predicted Functions.

Functional Associations

LINC00999 has 427 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 9 datasets.

Click the + buttons to view associations for LINC00999 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles tissues with high or low expression of LINC00999 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset.
Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles tissues with high or low expression of LINC00999 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00999 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of LINC00999 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
HPA Cell Line Gene Expression Profiles cell lines with high or low expression of LINC00999 gene relative to other cell lines from the HPA Cell Line Gene Expression Profiles dataset.
HPA Tissue Gene Expression Profiles tissues with high or low expression of LINC00999 gene relative to other tissues from the HPA Tissue Gene Expression Profiles dataset.
HPA Tissue Sample Gene Expression Profiles tissue samples with high or low expression of LINC00999 gene relative to other tissue samples from the HPA Tissue Sample Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00999 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles cell lines with high or low expression of LINC00999 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset.