LINC01002 Gene

Name long intergenic non-protein coding RNA 1002
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n An integrated review of recent findings indicates that while dysregulation of key components of the miRNA biogenesis pathway—such as AGO2, DCR1, and STAT3—may drive inflammation in post‐traumatic stress disorder (PTSD)"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ", long non‐coding RNAs (lncRNAs) are emerging as important players in other disease contexts. In lung adenocarcinoma, for example, LINC01002 was identified among a panel of nine prognostic lncRNAs whose expression levels are significantly altered in tumor tissues relative to normal controls."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " Within a constructed miRNA–lncRNA–mRNA regulatory network, LINC01002 is postulated to function as a competing endogenous RNA (ceRNA) that may modulate miRNA availability and thereby influence downstream gene expression critical for tumor progression. This suggests that altered LINC01002 expression might not only serve as a prognostic biomarker in lung adenocarcinoma but also could be a potential therapeutic target through its involvement in fine‐tuning cancer‐related post‐transcriptional regulatory circuits.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "M Bam, X Yang, E E Zumbrun, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Decreased AGO2 and DCR1 in PBMCs from War Veterans with PTSD leads to diminished miRNA resulting in elevated inflammation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Transl Psychiatry (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/tp.2017.185"}], "href": "https://doi.org/10.1038/tp.2017.185"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28850112"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28850112"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "D-S Li, J-L Ainiwaer, I Sheyhiding, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of key long non-coding RNAs as competing endogenous RNAs for miRNA-mRNA in lung adenocarcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Eur Rev Med Pharmacol Sci (2016)"}]}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27338053"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27338053"}]}]}]}
NCBI Gene ID 399844
API
Download Associations
Predicted Functions View LINC01002's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC01002's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC01002's ARCHS4 Predicted Functions.

Functional Associations

LINC01002 has 297 functional associations with biological entities spanning 3 categories (functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 7 datasets.

Click the + buttons to view associations for LINC01002 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles tissues with high or low expression of LINC01002 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset.
Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles tissues with high or low expression of LINC01002 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC01002 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of LINC01002 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Kinase Perturbations kinase perturbations changing expression of LINC01002 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC01002 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
LOCATE Predicted Protein Localization Annotations cellular components predicted to contain LINC01002 protein from the LOCATE Predicted Protein Localization Annotations dataset.