LINC01012 Gene

Name long intergenic non-protein coding RNA 1012
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Although the provided abstracts chiefly detail the biology of ALK fusion proteins—including their roles in activating key signalling cascades such as Ras/ERK, PI3K/Akt, and JAK/STAT, as well as their involvement in epigenetic regulation via DNA methylation and miRNA expression"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "—neither abstract explicitly addresses the function of the long intergenic non‐coding RNA LINC01012. In many contexts, long non‐coding RNAs regulate gene expression, affect chromatin structure, and interact with nuclear proteins to fine‐tune transcriptional programmes. Given these general roles, it is conceivable that LINC01012 could modulate similar pathways—potentially influencing the transcriptional or epigenetic landscapes in ALK‐driven malignancies. However, since the current abstracts do not provide direct data regarding LINC01012"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": ", further investigation is necessary to elucidate its precise function and its potential interplay with oncogenic ALK signalling mechanisms.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Stephen P Ducray, Karthikraj Natarajan, Gavin D Garland, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The Transcriptional Roles of ALK Fusion Proteins in Tumorigenesis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancers (Basel) (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3390/cancers11081074"}], "href": "https://doi.org/10.3390/cancers11081074"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31366041"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31366041"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Bishu Zhang, Jiewei Lin, Jiaqiang Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Integrated Chromatin Accessibility and Transcriptome Landscapes of 5-Fluorouracil-Resistant Colon Cancer Cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Cell Dev Biol (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3389/fcell.2022.838332"}], "href": "https://doi.org/10.3389/fcell.2022.838332"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35252200"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35252200"}]}]}]}
NCBI Gene ID 100507173
API
Download Associations
Predicted Functions View LINC01012's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC01012's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC01012's ARCHS4 Predicted Functions.

Functional Associations

LINC01012 has 155 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 4 datasets.

Click the + buttons to view associations for LINC01012 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC01012 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of LINC01012 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Kinase Perturbations kinase perturbations changing expression of LINC01012 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC01012 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.