| Name | long intergenic non-protein coding RNA 1016 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Recent studies have revealed that the long non‐coding RNA LINC01016 functions as a multifaceted regulator in hormone‐related cancers. In estrogen receptor–positive luminal breast cancer, LINC01016 has been identified as a direct transcriptional target of ERα and is implicated in modulating estrogen signaling, cell proliferation, and autophagy‐related pathways – thereby serving as a promising prognostic biomarker."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In endometrial cancer, LINC01016 is significantly upregulated and exerts oncogenic effects by acting as a competing endogenous RNA; it sequesters miR‑302a‑3p and miR‑3130‑3p to relieve suppression of NFYA, which in turn upregulates SATB1 and promotes malignant cellular behaviors."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " Detailed molecular characterization of LINC01016 further suggests that isoform variability and resultant conformational changes may influence its functional roles in cancer pathogenesis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": " Moreover, altered expression of LINC01016 has been found to correlate with lymph node metastasis in thyroid carcinoma, indicating its potential involvement in tumor dissemination beyond breast and endometrial malignancies."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": " Collectively, these findings underscore the emerging importance of LINC01016 as a critical mediator of hormone-driven oncogenic processes and as a potential target for diagnostic and therapeutic strategies across multiple cancer types.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Philip Jonsson, Cristian Coarfa, Fahmi Mesmar, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Single-Molecule Sequencing Reveals Estrogen-Regulated Clinically Relevant lncRNAs in Breast Cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Endocrinol (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1210/me.2015-1153"}], "href": "https://doi.org/10.1210/me.2015-1153"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26426411"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26426411"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Xiaoying Li, Feng Jin, Yang Li "}, {"type": "b", "children": [{"type": "t", "text": "A novel autophagy-related lncRNA prognostic risk model for breast cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Mol Med (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/jcmm.15980"}], "href": "https://doi.org/10.1111/jcmm.15980"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33216456"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33216456"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Xin Pan, Da Li, Jianing Huo, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC01016 promotes the malignant phenotype of endometrial cancer cells by regulating the miR-302a-3p/miR-3130-3p/NFYA/SATB1 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Death Dis (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41419-018-0291-9"}], "href": "https://doi.org/10.1038/s41419-018-0291-9"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29467441"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29467441"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Enrique I Ramos, Barbara Yang, Yasmin M Vasquez, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Characterization of the Testis-specific "}, {"type": "a", "children": [{"type": "t", "text": "i"}], "href": "i"}, {"type": "t", "text": "LINC01016"}, {"type": "a", "children": [{"type": "t", "text": "/i"}], "href": "/i"}, {"type": "t", "text": " Gene Reveals Isoform-specific Roles in Controlling Biological Processes."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Endocr Soc (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1210/jendso/bvab153"}], "href": "https://doi.org/10.1210/jendso/bvab153"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34703959"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34703959"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Yun Zhang, Taobo Jin, Haipeng Shen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of Long Non-Coding RNA Expression Profiles and Co-Expression Genes in Thyroid Carcinoma Based on The Cancer Genome Atlas (TCGA) Database."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Med Sci Monit (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.12659/MSM.917845"}], "href": "https://doi.org/10.12659/MSM.917845"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31856144"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31856144"}]}]}]}
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| NCBI Gene ID | 100507584 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC01016 has 153 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 3 datasets.
Click the + buttons to view associations for LINC01016 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC01016 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of LINC01016 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC01016 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |