LINC01087 Gene

Name long intergenic non-protein coding RNA 1087
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC01087 has emerged as a multifunctional long non‐coding RNA involved in the regulation of tumor biology and other disease processes. In breast cancer, its expression appears to be subtype‐dependent; LINC01087 is reported to be downregulated in triple‐negative tumors yet upregulated in luminal tumors, with its deregulation serving not only as a diagnostic marker to distinguish these subtypes but also as a prognostic indicator, where altered levels correlate with patient survival outcomes."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "4"}]}, {"type": "t", "text": " In mechanistic studies, LINC01087 acts as a competing endogenous RNA by sponging various microRNAs – for example, miR-335-5p in breast cancer to modulate ROCK1 expression, and miR-1277-5p in glioma to regulate ACER3 levels – thereby influencing key cellular processes such as cell survival, proliferation, invasion, migration, and apoptosis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}, {"type": "fg_f", "ref": "2"}, {"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": " Similar ceRNA mechanisms have been observed in thyroid cancer, where LINC01087 sponges miR-135a-5p to affect PPM1E expression and promote malignant behavior"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": ", while it has also been incorporated into biomarker panels for prognosis prediction in esophageal carcinoma"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": "and identified as a candidate regulator in high-throughput deletion screening of cancer growth modulators."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": " Moreover, LINC01087 is suggested to be part of an m6A-related lncRNA network with potential relevance to gestational diabetes mellitus."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "11"}]}, {"type": "t", "text": " Altogether, these studies underscore the context-dependent oncogenic or tumor-suppressive functions of LINC01087, highlighting its value as a diagnostic, prognostic, and potentially therapeutic biomarker in diverse disease settings.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Fatima Domenica Elisa De Palma, Valentina Del Monaco, Jonathan G Pol, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The abundance of the long intergenic non-coding RNA 01087 differentiates between luminal and triple-negative breast cancers and predicts patient outcome."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Pharmacol Res (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.phrs.2020.105249"}], "href": "https://doi.org/10.1016/j.phrs.2020.105249"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33068730"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33068730"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Ji-Kai She, Dan-Ni Fu, Dong Zhen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC01087 is Highly Expressed in Breast Cancer and Regulates the Malignant Behavior of Cancer Cells Through miR-335-5p/Rock1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Onco Targets Ther (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.2147/OTT.S255994"}], "href": "https://doi.org/10.2147/OTT.S255994"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33061456"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33061456"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Rashmi Tripathi, Imlimaong Aier, Pavan Chakraborty, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Unravelling the role of long non-coding RNA - "}, {"type": "a", "children": [{"type": "t", "text": "i"}], "href": "i"}, {"type": "t", "text": "LINC01087"}, {"type": "a", "children": [{"type": "t", "text": "/i"}], "href": "/i"}, {"type": "t", "text": " in breast cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Noncoding RNA Res (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.ncrna.2019.12.002"}], "href": "https://doi.org/10.1016/j.ncrna.2019.12.002"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31989062"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31989062"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Leimarembi Devi Naorem, Vigneshwar Suriya Prakash, Mathavan Muthaiyan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Comprehensive analysis of dysregulated lncRNAs and their competing endogenous RNA network in triple-negative breast cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int J Biol Macromol (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.ijbiomac.2019.12.196"}], "href": "https://doi.org/10.1016/j.ijbiomac.2019.12.196"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31883894"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31883894"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Wangsheng Chen, Fei Wang, Jianhua Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC01087 indicates a poor prognosis of glioma patients with preoperative MRI."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Funct Integr Genomics (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s10142-021-00812-w"}], "href": "https://doi.org/10.1007/s10142-021-00812-w"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34817752"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34817752"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Yao-Hui Tian, Lin-Wei Jia, Zhi-Feng Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC01087 inhibits glioma cell proliferation and migration, and increases cell apoptosis via miR-384/Bcl-2 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Aging (Albany NY) (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.18632/aging.203478"}], "href": "https://doi.org/10.18632/aging.203478"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34459789"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34459789"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Ying Yin, Jianhao Huang, Hongyan Shi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC01087 Promotes the Proliferation, Migration, and Invasion of Thyroid Cancer Cells by Upregulating PPM1E."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Oncol (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1155/2022/7787378"}], "href": "https://doi.org/10.1155/2022/7787378"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35368894"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35368894"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Jin Zhang, Fei Xiao, Guangliang Qiang, et al. 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NCBI Gene ID 101927994
API
Download Associations
Predicted Functions View LINC01087's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC01087's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC01087's ARCHS4 Predicted Functions.

Functional Associations

LINC01087 has 12 functional associations with biological entities spanning 1 categories (gene, protein or microRNA) extracted from 1 datasets.

Click the + buttons to view associations for LINC01087 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of LINC01087 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.