| Name | long intergenic non-protein coding RNA 1101 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Recent data indicate that LINC01101, a long intergenic non‐coding RNA, may be involved in modulating gene expression in the context of HPV‐induced cervical pathogenesis. In HPV18 E7‐silenced HeLa cells, significant downregulation of LINC01101 was observed, and reduced transcript levels were further confirmed in hrHPV‐positive cervical lesions and cancers. This pattern of decreased expression suggests that LINC01101 could act as a regulatory molecule in cervical neoplasia, potentially contributing to tumor suppression mechanisms that are compromised by HPV infection."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " \n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Although investigations in other biomedical contexts, such as breast cancer risk by single nucleotide polymorphisms (SNPs) and chromosomal translocations associated with limb malformations, have provided insights into diverse genetic and regulatory mechanisms"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": ", none of these studies reported a role for LINC01101. In contrast, the findings related to HPV‐associated cervical disease specifically emphasize the significance of LINC01101 downregulation as a potential marker or mediator in the progression of HPV‐induced oncogenesis.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Iulia Virginia Iancu, Gabriela Anton, Anca Botezatu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC01101 and LINC00277 expression levels as novel factors in HPV-induced cervical neoplasia."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Mol Med (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/jcmm.13288"}], "href": "https://doi.org/10.1111/jcmm.13288"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28767188"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28767188"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Xu Li, Wenjing Zou, Ming Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Association of multiple genetic variants with breast cancer susceptibility in the Han Chinese population."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncotarget (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.18632/oncotarget.13402"}], "href": "https://doi.org/10.18632/oncotarget.13402"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27863437"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27863437"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Christian Babbs, Raoul Heller, David B Everman, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A new locus for split hand/foot malformation with long bone deficiency (SHFLD) at 2q14.2 identified from a chromosome translocation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Genet (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s00439-007-0390-7"}], "href": "https://doi.org/10.1007/s00439-007-0390-7"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17569090"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17569090"}]}]}]}
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| NCBI Gene ID | 84931 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC01101 has 229 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 4 datasets.
Click the + buttons to view associations for LINC01101 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray | tissue samples with high or low expression of LINC01101 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC01101 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of LINC01101 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC01101 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |