LINC01119 Gene

Name long intergenic non-protein coding RNA 1119
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC01119, a long non‐coding RNA, has emerged as a multifaceted regulator in diverse biological contexts including tumor biology, stem cell differentiation, and neuropathic pain. In colorectal cancer cells, LINC01119 was identified as a novel hypoxia‐responsive lncRNA among several others that are differentially expressed during hypoxic stress."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " During the adipogenic differentiation of adipose‐derived stem cells, LINC01119 was found to be among the lncRNAs potentially involved in regulating adipogenesis, possibly through acting as a competing endogenous RNA or via co‐expression networks with key target genes."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " In the context of mesenchymal stem cells, LINC01119 functions as a negative regulator of osteogenic differentiation by modulating the Wnt signaling pathway through targeting FZD4, with its expression being directly influenced by the transcription factor EBF3."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " Moreover, evidence from neuropathic pain models indicates that LINC01119 is upregulated in association with pain hypersensitivity, where it promotes the stabilization and increased expression of brain‐derived neurotrophic factor (BDNF) mRNA by forming a complex with the RNA binding protein ELAVL1; this mechanism contributes to neuroinflammation and pain progression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": " In addition, mesenchymal stem/stromal cell interactions in triple‐negative breast cancer stimulate robust LINC01119 expression in cancer cells, which in turn induces SOCS5 expression, thereby enhancing tumor growth and progression; the LINC01119–SOCS5 axis correlates with poor prognosis in these patients."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": " Finally, LINC01119 has also been included in a signature panel of lncRNAs associated with recurrence prognoses in cervical cancer, suggesting its potential as a prognostic biomarker in oncological settings."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Yi Han, Xiaoyan Wang, Enqiang Mao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Analysis of Differentially Expressed lncRNAs and mRNAs for the Identification of Hypoxia-Regulated Angiogenic Genes in Colorectal Cancer by RNA-Seq."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Med Sci Monit (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.12659/MSM.915179"}], "href": "https://doi.org/10.12659/MSM.915179"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30880326"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30880326"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Kana Chen, Shujie Xie, Wujun Jin "}, {"type": "b", "children": [{"type": "t", "text": "Crucial lncRNAs associated with adipocyte differentiation from human adipose-derived stem cells based on co-expression and ceRNA network analyses."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PeerJ (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.7717/peerj.7544"}], "href": "https://doi.org/10.7717/peerj.7544"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31534842"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31534842"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Hongwei Gao, Hui Dong, Jiachun Zheng, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC01119 negatively regulates osteogenic differentiation of mesenchymal stem cells via the Wnt pathway by targeting FZD4."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Stem Cell Res Ther (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s13287-022-02726-1"}], "href": "https://doi.org/10.1186/s13287-022-02726-1"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35093173"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35093173"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Jia Zhao, Li Yang, Limin Huang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Screening of disease-related biomarkers related to neuropathic pain (NP) after spinal cord injury (SCI)."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Genomics (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s40246-021-00303-w"}], "href": "https://doi.org/10.1186/s40246-021-00303-w"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33494823"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33494823"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Le Zhang, Hao Feng, Yanwu Jin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long Non-coding RNA LINC01119 Promotes Neuropathic Pain by Stabilizing BDNF Transcript."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Mol Neurosci (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3389/fnmol.2021.673669"}], "href": "https://doi.org/10.3389/fnmol.2021.673669"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34234645"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34234645"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Zhenbo Tu, Johannes Schmoellerl, Odette Mariani, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The LINC01119-SOCS5 axis as a critical theranostic in triple-negative breast cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "NPJ Breast Cancer (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41523-021-00259-z"}], "href": "https://doi.org/10.1038/s41523-021-00259-z"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34059683"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34059683"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Haiyan Ding, Li Zhang, Chunmiao Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Screening of Significant Biomarkers Related to Prognosis of Cervical Cancer and Functional Study Based on lncRNA-associated ceRNA Regulatory Network."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Comb Chem High Throughput Screen (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.2174/1386207323999200729113028"}], "href": "https://doi.org/10.2174/1386207323999200729113028"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32729415"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32729415"}]}]}]}
NCBI Gene ID 100134259
API
Download Associations
Predicted Functions View LINC01119's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC01119's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC01119's ARCHS4 Predicted Functions.

Functional Associations

LINC01119 has 274 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 8 datasets.

Click the + buttons to view associations for LINC01119 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq tissue samples with high or low expression of LINC01119 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC01119 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of LINC01119 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Kinase Perturbations kinase perturbations changing expression of LINC01119 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset.
HPA Cell Line Gene Expression Profiles cell lines with high or low expression of LINC01119 gene relative to other cell lines from the HPA Cell Line Gene Expression Profiles dataset.
HPA Tissue Gene Expression Profiles tissues with high or low expression of LINC01119 gene relative to other tissues from the HPA Tissue Gene Expression Profiles dataset.
HPA Tissue Sample Gene Expression Profiles tissue samples with high or low expression of LINC01119 gene relative to other tissue samples from the HPA Tissue Sample Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC01119 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.