| Name | long intergenic non-protein coding RNA 1121 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Long intergenic noncoding RNA 01121 (LINC01121) has been implicated in the regulation of cellular processes involved in pathological tissue remodeling. In studies examining intervertebral disc degeneration (IDD), LINC01121 was found to be up‐regulated in nucleus pulposus cells upon exposure to inflammatory stimuli (e.g., IL‑1β and TNF‑α) and in IDD specimens, with its expression positively correlating with the degeneration grade (1). Functionally, ectopic expression of LINC01121 enhanced cell proliferation, promoted the expression of markers for extracellular matrix degradation—such as matrix metalloproteases (MMP‑3) and aggrecanases (ADAMTS5)—and increased secretion of pro‑inflammatory cytokines, while concurrently suppressing collagen II synthesis. Mechanistically, LINC01121 reduces miR‑150‑5p levels, thereby de‐repressing its target, MMP‑16, which in turn contributes to matrix degradation in the disc environment (1)."}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n In another context, treatment with metformin in breast cancer cells resulted in the up‑regulation of several long noncoding RNAs including LINC01121, suggesting that this lncRNA may also be involved in epigenetic regulatory networks influencing cell cycle and apoptotic pathways (2). Although the functional consequences of LINC01121 up‑regulation in this setting require further elucidation, preliminary evidence indicates that it might participate in cellular responses to therapeutic intervention, potentially affecting tumor growth and progression.\n "}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Additionally, initial knockdown studies (3) hint at a broader role for LINC01121 in modulating disease‐related cellular pathways. Collectively, these findings support a role for LINC01121 in promoting pathological cell proliferation, extracellular matrix remodeling, and inflammation in IDD, while also suggesting that it may be involved in epigenetic responses in cancer. Further studies are warranted to fully characterize the mechanistic basis of LINC01121 action and its potential as a therapeutic target.\n "}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "b", "children": [{"type": "t", "text": "References:"}]}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n (1)"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "<br>\n (2)"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "<br>\n (3)."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Xin Chen, Zheng Li, Derong Xu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC01121 induced intervertebral disc degeneration via modulating miR-150-5p/MMP16 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Gene Med (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jgm.3231"}], "href": "https://doi.org/10.1002/jgm.3231"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32436632"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32436632"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Yongye Huang, Ziyan Zhou, Jin Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "lncRNA MALAT1 participates in metformin inhibiting the proliferation of breast cancer cell."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Mol Med (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/jcmm.16742"}], "href": "https://doi.org/10.1111/jcmm.16742"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34164906"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34164906"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Zhuolu Wang, Pinghu Wang, Lin Cao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long Intergenic Non-Coding RNA 01121 Promotes Breast Cancer Cell Proliferation, Migration, and Invasion via the "}, {"type": "a", "children": [{"type": "t", "text": "i"}], "href": "i"}, {"type": "t", "text": "miR-150-5p"}, {"type": "a", "children": [{"type": "t", "text": "/i"}], "href": "/i"}, {"type": "t", "text": "/HMGA2 Axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Manag Res (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.2147/CMAR.S230367"}], "href": "https://doi.org/10.2147/CMAR.S230367"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31920395"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31920395"}]}]}]}
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| Synonyms | UNQ6975 |
| NCBI Gene ID | 400952 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC01121 has 372 functional associations with biological entities spanning 4 categories (molecular profile, disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA) extracted from 13 datasets.
Click the + buttons to view associations for LINC01121 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray | tissue samples with high or low expression of LINC01121 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC01121 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of LINC01121 gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of LINC01121 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at LINC01121 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of LINC01121 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of LINC01121 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of LINC01121 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Kinase Perturbations | kinase perturbations changing expression of LINC01121 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset. | |
| GWASdb SNP-Disease Associations | diseases associated with LINC01121 gene in GWAS and other genetic association datasets from the GWASdb SNP-Disease Associations dataset. | |
| GWASdb SNP-Phenotype Associations | phenotypes associated with LINC01121 gene in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC01121 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at LINC01121 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |